Pseudomonas mendocina EGD-AQ5, O203_RS26135
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina EGD-AQ5 contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCGATACTCATTCGCTGGTTTGCCGTTGGCGCTATTACTGGTTAGCGGTTGCATGGCGAAAGAGTCCGAAATGCTCGGAGCTCCTGTCGAGGGTTATA ACCACACGTCTGCTGCCATCAACCGATTTACTGTTAACGGTGCCGGAGGGCCAAATCTAGGGCCTTATGGTGGTGGGGGCGGACAGGTTTGTTGTGGCAC TGTGCCGCGTCATTGGCGCCCTGGGCTCAGAGCTATTGTGGAGTGGGAGAAGGATCCAAATCCTGGCGCCTCTGTTGGATGGCCGACTCACGGCACGGAT GGATGGCGGGAGGCATATAAGAAACACGCAGCTAATTACACCCGCCACCGTGTAGTGGTGGAGATTCCTCAGTACCAGGAAGCCGGGACATTGAAAGTGC ATTTTCTGCCCTGCAATCAGGTGAGAGTTTCGGCAGACAATATTTTCTACGGGGTTTCCGGCTACCCCTATAACTTTCCCCGCAAGATGGAGGATACGGA
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| DNA Sequence for Gene |
>O203_RS26135
ATGTCCAAAACCTTGAAGCCACAGCCTGCCAGTGTGCTGATTGCACGTCCTTTCGAACGCACGGGCCTACCAATCGACTCAGCAGAGGTCGCCACAAATA TTCGCAGCCAGAATCGTGATGAGAAGAAGGCCTGGAGCAAGGCCGTCAACGCTGCGGCTAAGCAAGGTGACGAAGTGCCCGAGCCCTGCTGCAAGACTTT GCATATCAGCCTTTGCTTCGATGGCACCAATAATCACGAGCCCTCGGACTCCATTGCCGACCCAATATGCACGAGCAATGTGGCGCGCCTTTACCACGCA AGTCTCGAGAAAACGGAAAAAGGGTTTTTCCGATACTACAGTCCAGGGGTAGGCACTGTTTTCGAGGAGATCAAAGAATACCTGCCCAGCCAGGCTGGTC TGATCGGGGCTCGTGGTGGCGAAGATCGGATCAATTGGGGGCTTACTCGCTTAATCGCAGCATTGAAGGAAACCCTCAAGGAGGCAGGCCAGGAGCCGCT TTCTCTTAGCCAGACACAGACGCTGGTCGAGGCCATGGGCACCAAATGGGCAGCGTCCGTGCTCAGTGGTGGGCTACTGGAAAATGGCGCCCGCAAGCGC AAGGCTGCGATACAGCCATACGAGGACGAACTGGCCAGCTTGCTGGAGCAACGCGGCAGCGCAGGCGAGAAGCCGGAAATCCTGGCCTTGCGCCTGTATG TCTATGGCTTTTCCCGTGGCGCAGCCCAAGCCCGAACCTTCGCCAACTGGTTGATGGAGCTGACGCGCCGGCAAAACGGCGAGGCCAGTGAATACCGTTT CGCCGGGCTACCCATTTCTATTGAGTTCCTGGGCCTGTTCGATACCGTGGCCGCCGTGGGGCTGGCTGACAGCGCGCCTTTCGCCGCCGGTCATATGGAT TGGGCCAGCGGCACCATGCGCTTGCCGGACGAAAGTCAGGTGCAAGCCTGCATGCCAACTGGGCTGCCTGAAGATTGTCGTTTTCTCAAGCGCTGCGTGC ATCTTGTCTCCGGCCATGAGCAGCGTGCCAGCTTCCCGCTGGACTCCATTCGCCGCCGAGAGAAGACCGCCGCCGGAAAGCGTGATGAAACAAAGGCGTC CGCCTATCGCAAGGACACCTGGGAATACGTCTATCCGGGTATGCACTCCGATGTAGGTGGTGGCTATCCGCCAGGCGATCAGGGCAAGGCCCTTGGTGGT CAGGGCGAGTTGCTGTCGCAGATCCCCCTGCACCATATGTATCGCTCGGCCTTTGCTGCGGGTGCGCCGCTGCAGGTGCCGGAGCAGCTTCTTGATGAAA ATGAGTGTTGGCGAAAAATGGGGGAGTCGACTCTTGAAGAGTTCGACTTCACCCCACAACTCGTTACCCGCTTCAACGCCTGGCAGAAACAGGCCAAGGC CCGCCCTCTCGAGGATGTTATCGAGCGCGAGCAGGCCCTGATCACGGCCTGGCGTATCAATCGCTATGCTGGCGGCATCGACAAGCAGGGCTTTTACAGC CATGTAAAAAAACAGGACATGAGCGATGAGCAGCAGGATGCTCTGAAACGCCTGCATGCCCATAAACTGGCGGAAAATGCTGCAGCGGCTCAGGGCAAGG AAGCACCTGTGCTTAGCGAGCGCAAGCAGCAACAACGCGAGGCGGATCTCGAGTTGGTCGGGGGAAGCGAGGCTTATGCGCGTATCAATACCAACAAGGC GTTCGAGCCAGCGCTGGATGACCGGCAATTGCGCCGTGCAGCCGCCGAGTTCAAGCGTGATTACGAGCGCAGCTGGGGTGTCGACGAAGACACCTTCAGC GTCGGTGGCATCATCAACATGCTGCTGGGTGGCACGGTCTACCTGATCAACGAAGAAGATGAAGCTCAGGAATACGCCGAGCTTTATCAGAACGGCACGC AGCGCCATGGTGAGATATTCACCAAGTCGGGCGTCATCGTAAGTGGGGAGCAAGATCTGGTCGCGCTTTTCGACGAGCAGGTACACGACTCACGTGCCTG GTTCATGAACTCTTCAGGTCTTGGCGAGCGTGAGCCTTTTACCGATTACTTTCGTTACCGCCTGGTGCATTTCGACAATGAGTCGAACAAGAGCCTATCG GTACTGGCGACTGCCGGTCGTGTGGTTGGCGTAGGTATAGCCTTGGCCAGCGTCGGGCTCTCGATCAAGAAGCGCAATCCCCGCTACTTGCTCGGCCTTT TCTTGCCCTCGCTGGCCACTCCCGTGCTGACGGGCAGGCCAGGCTTACCGGCTATCCCGCAAATCAGCGCATTCGATCCGTTGACCGGCATCGCACTGCC GATGATGCAAGGCATGGAAGCTGTGCGAGCCTTTACTCAAAAGCCTGGTGACGTGGTGGCCATGCTCAACGCTATGCCGTTGCCCGTACCGCTCACCGAG CAAACCGCTACTACGCCAGAGCTGCAAGCTGTCTTCAAAGCCGCCGAAACGGCTAAGGCAGTCAAAGCTGCCAATGACGCTGGTGATATGAGCGGTCTAC TGGGGCAAGCGATGGATATGGTGGGCAAGAGCGACCCCAAGCCAGGGCTGCAATCTCCCGGTTGGCTGGATCAGGCCAAAGGCATGGCCAAGGATCTCAC AGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGTCAAGGGCAGCGGCGCATGCCTGCGTTGCTGCCCGTGCCTGCTTACGGTTTTACCGTCTCCAGCGCAGTCTTCAGAGCTTCCGCCTCCCTGAACACC TTCTGCTCCACCAACTTCCCATCCTCCAACTGCAACCACAGCACCTCACCCTCGCCAGCCGGATAGCGCGGGGCGATGCGGGCGTCGTGGTCGAGGAGGA TGCGGTAGTTGTAGTCGCGCATCTTCGGCAGGGCGAAGAGGGTGGCGATGATGCGGGGCATGCGGCTGATATCGGCGAGGAACACTGCCTGGCGCTCGTC CAAGTAGCCCTTGGGCTTGCCTTCCAGGGCAGCGTTGACCAGTTTGGCGCCGTCCATGTCGCGGGCGACCAGCAGGATGCGGGTCTCGTCGTTCAGGGTG TAGGGCACGTCATGCTGATCCAGCAGCGTCCAGGGTGCCAGGCGTTCGCCGGGCTCCAGAGCCAGTACGGCGGTAGACAGCAGGCACAGCAACAACAGGG
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| Amino Acid Sequence |
>hypothetical protein
MSKTLKPQPASVLIARPFERTGLPIDSAEVATNIRSQNRDEKKAWSKAVNAAAKQGDEVPEPCCKTLHISLCFDGTNNHEPSDSIADPICTSNVARLYHA SLEKTEKGFFRYYSPGVGTVFEEIKEYLPSQAGLIGARGGEDRINWGLTRLIAALKETLKEAGQEPLSLSQTQTLVEAMGTKWAASVLSGGLLENGARKR KAAIQPYEDELASLLEQRGSAGEKPEILALRLYVYGFSRGAAQARTFANWLMELTRRQNGEASEYRFAGLPISIEFLGLFDTVAAVGLADSAPFAAGHMD WASGTMRLPDESQVQACMPTGLPEDCRFLKRCVHLVSGHEQRASFPLDSIRRREKTAAGKRDETKASAYRKDTWEYVYPGMHSDVGGGYPPGDQGKALGG QGELLSQIPLHHMYRSAFAAGAPLQVPEQLLDENECWRKMGESTLEEFDFTPQLVTRFNAWQKQAKARPLEDVIEREQALITAWRINRYAGGIDKQGFYS HVKKQDMSDEQQDALKRLHAHKLAENAAAAQGKEAPVLSERKQQQREADLELVGGSEAYARINTNKAFEPALDDRQLRRAAAEFKRDYERSWGVDEDTFS VGGIINMLLGGTVYLINEEDEAQEYAELYQNGTQRHGEIFTKSGVIVSGEQDLVALFDEQVHDSRAWFMNSSGLGEREPFTDYFRYRLVHFDNESNKSLS VLATAGRVVGVGIALASVGLSIKKRNPRYLLGLFLPSLATPVLTGRPGLPAIPQISAFDPLTGIALPMMQGMEAVRAFTQKPGDVVAMLNAMPLPVPLTE QTATTPELQAVFKAAETAKAVKAANDAGDMSGLLGQAMDMVGKSDPKPGLQSPGWLDQAKGMAKDLTG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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