Pseudomonas aeruginosa UCBPP-PA14, PA14_44710 (xdhA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004854 xanthine dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02963
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01799
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11908
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF56176
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00941
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54292
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Nucleotide biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc inosine 5'-phosphate degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc caffeine degradation III (bacteria, via demethylation) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc adenosine nucleotides degradation I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc guanosine nucleotides degradation I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc theophylline degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc guanosine nucleotides degradation II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc purine nucleobases degradation II (anaerobic) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc guanosine nucleotides degradation III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.10.20.30 - IPR012675 Beta-grasp domain superfamily 1 89 4.7E-27
Pfam PF01799 [2Fe-2S] binding domain IPR002888 [2Fe-2S]-binding 86 158 2.7E-29
CDD cd00207 fer2 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 2 77 2.89866E-5
Gene3D G3DSA:3.30.390.50 - - - 366 475 1.5E-29
Gene3D G3DSA:1.10.150.120 - - - 90 195 3.2E-34
SUPERFAMILY SSF47741 CO dehydrogenase ISP C-domain like IPR036884 [2Fe-2S]-binding domain superfamily 97 201 1.26E-33
SUPERFAMILY SSF54292 2Fe-2S ferredoxin-like IPR036010 2Fe-2S ferredoxin-like superfamily 3 90 1.7E-18
Gene3D G3DSA:3.30.43.10 - IPR016167 FAD-binding, type PCMH, subdomain 1 201 247 1.4E-17
PIRSF PIRSF036557 XdhA_RC IPR012175 Xanthine dehydrogenase, small subunit, bacteria 1 484 0.0
PANTHER PTHR11908 XANTHINE DEHYDROGENASE IPR016208 Aldehyde oxidase/xanthine dehydrogenase 4 471 1.1E-93
SMART SM01092 CO_deh_flav_C_2 IPR005107 CO dehydrogenase flavoprotein, C-terminal 370 471 3.7E-33
SUPERFAMILY SSF55447 CO dehydrogenase flavoprotein C-terminal domain-like IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily 368 473 1.07E-32
Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain IPR005107 CO dehydrogenase flavoprotein, C-terminal 370 471 5.4E-31
SUPERFAMILY SSF56176 FAD-binding/transporter-associated domain-like IPR036318 FAD-binding, type PCMH-like superfamily 184 361 2.98E-53
Gene3D G3DSA:3.30.465.10 - IPR016169 FAD-binding, type PCMH, subdomain 2 248 362 1.1E-31
Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase IPR002346 Molybdopterin dehydrogenase, FAD-binding 199 362 2.1E-50
Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 13 76 6.4E-6
NCBIfam TIGR02963 JCVI: xanthine dehydrogenase small subunit IPR014307 Xanthine dehydrogenase, small subunit 2 470 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.