Pseudomonas aeruginosa UCBPP-PA14, PA14_37730
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGCCCTGCCAGAAGGCCGTGGTCGCCGCCGAGGTGATGGTGATGCCGCGCTCCTGCTCCTGGACCATCCAGTCCATGGTCGCCGCGCCGTCATGGACC TCGCCCATCTTGTGGTTGACGCCGGTGTAGAAGAGGATCCGCTCGGTCGTCGTGGTCTTGCCGGCGTCGACGTGGGCGACGATGCCGATGTTGCGATAAA GCTCGATGGGAGTGGTGCGAGCCATGATCTGCCCCTTGGGTGCTGCCCTGGATGATGGGAACGACTGCTGAAAGAAAAATGTAGCTGAAGAAAGGACGCC ACAGCACCGCCGCGACGCCTGCTTTTCGACCTCGGCAGAGGGGACTGGTTCTGCCGCTCCGGCCCGCCGATGAAAGGCGCAACGGCAGGGCTTGTTCCCA GCGGACATAAACTCATGGCGCAAAGGTCTAAGCCGTCCCTGGAAAATCCCCCGGCTCGACGGACATCCCTGGACACACCGGAACAAGGGATGCCCCGACC
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| DNA Sequence for Gene |
>PA14_37730
ATGCACCGATCGCTCCACACCGACCCGCCGCTGGGCGCCGCCCTGCTGCTGGCCCTGCAGCTCGCTCCCAGCAGCGCCGCCGCGGCGGAGGGACAGGCGC CTGTCGACCCGCCCACGGTCCAGTTGCAACGAATCGAGGTGACCGGTAGCGCGATCCGCCGGGTCGATGCGGAAACCGCGGTGCCGATCAGCGTCCTGCG CGCCGAGGAGCTGCGCCAACAGGGCGTGACCAGCACCGAGGAACTGATCGGCCGGCTTTCCGGCAACCAGGGCGTATACAACTCCAGTCGCTCGGTCGGC AGCGCCACCGGCGGCGCCTCGTTCGCCGACCTGCGCGGGATCGGCGCGAACAAGACCCTGGTGCTGCTCAACGGCCGGCGTCTGGCGAACAATGCCATCG ACGGCTCCGCCGTGGATCTCAACACCATTCCCTTCGCCGCCATCGACCGGGTCGAGGTGCTGCGCGACGGCGCCTCCGCACTGTACGGCACCGATGCCAT CGGCGGGGTGATCAACTTCATCACCCGCAAGAGCCTGAACGAAGGCCGCGTCGACAGCGGCTACGCCTCCCCCACCCAGGACGGCGGCGGCAACCAGCGC AACGTCAGCGCTAGCTGGGGCTTCGGCGAGCTGGAGGAGGATCGCTTCAATGTCTTCGCGGTGGCCAACTACGACAAGCAGGAACGCCTCGGCGCCAAGG ACCGCGGCTACACCTACAACTACCAGCCGGGACGCGGCCTCGACTACAGCTCCGGCACCGCCTTCCCCGGCAACTGGAGCCAGGGCGCCAACGCCAGCAA TCCGCTGGCCGCCGGCGGTTGCAAGGGCGCCGACCTGATCCCGCGCAACGGCATCTGCCGGCAGAGCCTGTGGCGCTACCTCGACCTGGTGCCGGAAACC GAGAAGACCTCGGTGTTCAGCCGCGCCACCGGCAAGCTGGCCGACGAGCACAACGTCAGCCTGGAGTACTTCTGGTCGCGCAACGACAACGCTACCCAGG TCGGCCCAGGGACCCTCACCGGCCTGCAGATCGATCCCGGCACCGCCTTCTATCCCGGCAACGGCATCACTCCCGGTCCCGGCGGCTTCGTCCTCGACCC GAGCCGGCCGGTGGAGGTCAACTGGCGGCAGAGCGTGCTCGGGCCACGCCTGCAATCCTCGCAGAACACCGGCCAGCGCCTGCTGCTCGGCTTCGACGGC CAGTTCGCCGGCTGGGACTACGATATCGGCGCCTCGTACAACCAGAACAAGGTGGTCGACCATATCCACAGCGGCTACGTCGACGATCGCGCCGCCGCCC TCGGCATCGCCAACGGGACGCTGAACCCGTTCGGGCCGCAGACCGACGCCGGCCTCGCCTACCTCGGCAGCCATGCCCTGAGCGGCGACTTCCGTACCTC GGTCGGCCGCGTCAAGGGCCTGGACGCCCGCGCCAGCCGGGAGATCGGCGACTGGTTCGGCGCCGGGCCGGCGGCCCTGGCGCTGGGCGGCGAATTCCGC AAGGAAGCGTTCCACCAGGACATCCAGGACTTCGCCGGCAACGTGCAGAGCCTCGGCGTCGATCCCGCCGCCACGGTCAGCGGCGAGCGCAACCTGAAGG CGCAGTACGCCGAACTCAACGTGCCGGTGCTGGACAGCCTGGAACTCAGCGCGGCGATCCGCCACGACAAGTACAGCGACTTCGGCAGCACTACCAACCC GAAATATTCGTTCCGCTTCCAGCCGTTCCGCCAGTTGGTCCTGCGCGGCGCCTACAGCGAAGGTTTCCGCGCGCCGTCGCTGTACGAACTGTACAACCCG ACCTTCACCACCTATACCAGCGCCAACTACGACGACCCACGCCTGTGCGCCGGCGGCCAGCCGAGCCAGGGCGGCATCGCCAACCGCGACTGCGCCCAGC AGTTCTACAACGCCACCGGCGGCAACACCGACCTGCGACCGGAAACCGCGCGCAACGTTACCCTGGGCCTGGTCTACCAGCCGCTGCGCGACCTTTCCGT CGGCCTGGACTTCTGGTGGATCAGGATCGCCAACCAGATCGCCGAGTTTCCCGAAGCGGCGATCTTCGCCGACCCGCAGGCCTACGCCGGACGCATCGTG CGCAAGGCCGACGGCTCGATCGATCACGTCGTCACCGGACTGGCCAACCTCGGCAAAGTGAAGACCAGCGGCGTCGACCTGAGCCTCGATTATCGTTTCC CGGCCAGCCGCTACGGGCAGTTCGGGCTCGACCTGCAAGGCACCTACGTGTCCCGCTACGACTTCCAGCAGCAGATCGGCGGCCAGTACCTGGACAACGT CGGCGACTTCCAGGGCGTCGGCGTGATCGCCCGCTGGAAGCACGTCGCCAACGCCACCTGGAGCCGCGACGCCTGGCAGGCCACCCTGAGCAACCGCTAC ACCAGCGGCTACAACGACTACGATCGCGCCAGCCACGGCAGGGTCGGCTCGTGGAACCTCTGGGACCTGGCCGGCAGCTACCGCCTCAGCCATGCGCTGG GGCTGACCCTCGGGGTGAAGAACCTGTTCGACCGCGAACCGCCGTTCAGCAACCAGACCTACACCTTCCAGAGCGGCTACGACCCGCGCTACACCGATCC CTACGGGCGCATCCTGTTCGGCCGCCTCAGCTACAGCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCCGGCGCGGGCGCCCGGCCGGTATGGCCGGCAAGCCCGTCGACGGCTGTCCAGCTACCAGATCCGGTAGCCCTGCCAGATTTCGCAGGCGACCAGATC TGGCAGGTTGTTGGGCTCCCGGTGCCATGCAACCTATTACGCCTCTCGCCCCCCACCCGTTCGCGCAAGAGGACACCGCATGATCATTCTCGGGATCACC AACAACGACCTGGCCGGCGCCTGCCTGGTGCGCGACGGCGGGATCGTCGCCGCCGCCAGCGAGGAGCGCTTCACCCGCCAGAAGGACCACAAGGCCTGGC CGAGCCGCTCCATCGACTATGTGCTCGGCGAGGCCGGCATCGACCTGGCCGACATCGACCGCATCGCCTACGGCTGGAACGCCGGGTTCGACGCCGGGCG GCACCTCGACCTCTACCTGGACCGGGTCCTCGAGGAAACCCGCGAGCGTCCCGAGGGCCTGCCGCACCTGCGCAAGCGGATCGCCGACGAGATGGCCAAC
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| Amino Acid Sequence |
>TonB dependent receptor
MHRSLHTDPPLGAALLLALQLAPSSAAAAEGQAPVDPPTVQLQRIEVTGSAIRRVDAETAVPISVLRAEELRQQGVTSTEELIGRLSGNQGVYNSSRSVG SATGGASFADLRGIGANKTLVLLNGRRLANNAIDGSAVDLNTIPFAAIDRVEVLRDGASALYGTDAIGGVINFITRKSLNEGRVDSGYASPTQDGGGNQR NVSASWGFGELEEDRFNVFAVANYDKQERLGAKDRGYTYNYQPGRGLDYSSGTAFPGNWSQGANASNPLAAGGCKGADLIPRNGICRQSLWRYLDLVPET EKTSVFSRATGKLADEHNVSLEYFWSRNDNATQVGPGTLTGLQIDPGTAFYPGNGITPGPGGFVLDPSRPVEVNWRQSVLGPRLQSSQNTGQRLLLGFDG QFAGWDYDIGASYNQNKVVDHIHSGYVDDRAAALGIANGTLNPFGPQTDAGLAYLGSHALSGDFRTSVGRVKGLDARASREIGDWFGAGPAALALGGEFR KEAFHQDIQDFAGNVQSLGVDPAATVSGERNLKAQYAELNVPVLDSLELSAAIRHDKYSDFGSTTNPKYSFRFQPFRQLVLRGAYSEGFRAPSLYELYNP TFTTYTSANYDDPRLCAGGQPSQGGIANRDCAQQFYNATGGNTDLRPETARNVTLGLVYQPLRDLSVGLDFWWIRIANQIAEFPEAAIFADPQAYAGRIV RKADGSIDHVVTGLANLGKVKTSGVDLSLDYRFPASRYGQFGLDLQGTYVSRYDFQQQIGGQYLDNVGDFQGVGVIARWKHVANATWSRDAWQATLSNRY TSGYNDYDRASHGRVGSWNLWDLAGSYRLSHALGLTLGVKNLFDREPPFSNQTYTFQSGYDPRYTDPYGRILFGRLSYSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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