Pseudomonas aeruginosa UCBPP-PA14, PA14_34130 (icmF3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCCTGGTCGACGAGACCCTGGTCTTCAGCGCCTGGCCGGGGCAGGGCGCCTGGCAGGAAAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGG GCGAATACCTGCCGCTGGCGATCAAGCGCCTGCTCGACGAACGCGCCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTT CCGCGGTCGCCTGCGCGGGCCGCGCGGCGAGGCGCTGCACGAGAAGTGGCGGCAGGCGCTGTTCGCCTTCGCCTGGCAGCGCGAGGCGGACGCCGCCGAC CTCGGCCGTCGCCTTGAGCAGCCTGCCGCCGCGCCGCCACGGCGCCTGCCGGTGCGCGCGGCGCTGCCGGACGGTTTCCGCCTGGGCCTGGCGGTGCTCG GCCTGGTGCTGCTGATGAGCGGCATCGGGCACCTGTTCTGGCGCGACATCCAGCATGAAATGGCGGCGGTGACCCACCTGGCCGATGCGGAGCAGGCGCC
DNA Sequence for Gene
>PA14_34130 |icmF3
ATGAGCGGCGCGACGCTGTTCATGCTGGTTCTCCTCCTGCTGCTGCTGGCGCTGCTGCTGGGGGCGCTGGGCTGGTGGTGGCGGACCCGGGGCGGTACGG AGATCCGCAGCTTCTACGCGGCGGTCCGGCAGATGGAGCGCGAGCAGGGCTGGCAGGGCCGCTACGAAGCGCCCTGGCTGCTGATGCTCGGCAACGAGAC CGAGGGCGAGCAGTTGTGCGCTACCTGGCGCCTGCTGCCGGTGGCGCGTCCGGCCTGGTTCGGCCGCTGGTGGTCGGACGGCGAGGGGGCGATCCTGCTG GTGCCCGAGTCGGTGTTCCTGCCCGACGAGGGCCTGCGCCGGCAAAGCGGCGCCTGGCTGCGCCTGTTGCGTCTGTTCCTGCGCCTGCGCGGCAGGCGCG CGCTGGACGGGGTGGTCTGGAACATTCCGCTGGCGCGGTTGCAGGATGGCGAGCAGGCGGCCGCCCTCGGCCTCGCCGCCCGTCGTCGCTACGTGGAGCT GACCCAGCGCCTTGGCCTGAGCCTGCCGGTGTACGTGGTGATCACTGGCCTGGAAGACCTGCCGGGTTTCCAGGAACTTCTCGCGGCGCTGCCCGAGGAG GCGCGCGAGCGCGCCCTCGGCTGGTCCTCGCCGTTCGCCGCCGAGGCGGCCTGGCAGTCGCGCTGGTGCGAGCAGGCGCTGGAGGAAATCACCGCCACCC TGACCGAGTCGATCGTCGAACTCGGTACCTTGCGCGGCCAGGTGAACAACGACCTGTATTGCCTGCCGCCACGCCTGGAAAGCCTCCGCGGTTCGTTGCA GGCGCTGCTCGAACCGGTCTTCCAGGGCAACGCCAGGGGTGAGGCGCCGCGCTTTCGCGGTCTCTACCTGAGCGGCAGCGAGGCGGCGGGGGCGGCAAGC GACGAAGCCCTGCCGGCGGTCGACGCGCCGCGTCGGCGCAGCAGCTTCGCCAGCCAACTGTGGGCACGGCGGATCCTTGCCGAGGAAGGCCTGGCCCAGG CGGTGCCGCGCATCCTCCAGCTGCGCCAGCGCTGGCAGCGCGGTATCGGCCTCGTTGCGCTGTGCCTGTGCCTGCTCTGGGGCGGCCTGATGACCTGGGT CTGGCGTGACGCGCTGCGCGACGCCGGCGAACTGTCGCAACTGCTGCATGGCGCCAGCGAGCGCTACCAGCCGCTCGACGACGACACCCGGCGCGCCGCC CAGGTCCGGCAGAACGTCCAGGCCTGGTGGCAACTGGTGGCACAGGCGCCGCGCTGGCGCTTCACCTCGCTGGCGTTCCCCAGTTCCTGGTTTTCCTCCC TGGATGCACGTATCGACAGCGCGTATCGCCGCGTTTCCGAGCGCCTGCTGGTGCGCCCGCTGCGCAGCCTGCTGGAAGGCGAGGCGAGCGACCTGCGGGC GATCCGCAGCGACGGCCAGCCCGGCCTGAAGGAGGGCGACGACCCCAGCCAGTGGAAGGACTACCTGGCGGCGAAGGACCTGGTCGCCCGCGCCACTACC CTGGAGCGCCACAATCGCCTGTTCGCCCAGGCCATCGACAACCGCAAGACGCCGCTCGACGATCTCCTGCAACTGAGCAACGACGCCCTGGGCAGCAGCT ACAACGGCGGCAGCCTGGCGCGCCTGGCCTACTACAACCGCACGCTGTTCGCCGAGCGTCCGGCCGATCTCGCCGCCCTCGACCTGGGCCGGGTCGGCGC CACGGCGGCGGATAACTTCCATGACCTGATGGCACGCTGGCTGAACGCCTACTTTCTCACCGACAGCCTGGAACGCACCGGCAATGCCCTGACCCAGGAA CTCGCGCAGCTCGGCCAGGAACGAGATGCCACGGCGGCCCAGTTGCTGGGGGTCGGCGAATTGATCAACCACCTGCAGCAGCAGGTCAACCGCATCAACC TGATCTGGGGCAATGGCGTCGGCCAGGATCTCGTCCCTGGCTACCAGAACCTGCTCAAGAGCGCCCAGCAAAGCAGCCTGCTGGGAGATCGCGTGGAGGA ACTGCAGAACCTCACGGTGCAGTTGCAGCAGCAGTTCCGCAGCGAATGGATCGCGCCTCCGGAGGCTGCCGGCGACGGCCTGCTGGTGAAACAGGGTGCG ACGCTCAAGCTGGCCGATGACCTGCTCGGCCTGAAACGCGCCATCGATGACCTGAAGACCAAGGACTTCGTCTCCGTGGCCCTGGCCGGCAAGACACTGG CGGAGCACTCCTTGCTGAGCATCGACGACATCGGCGTGACTCAGGCGTTGAGCTTCTTCAACGACTTCAGCGGCTACTACGAGAGCACCCTGCCGTCGCT CAACCCGCGCTATCGCTACTCGGTCCTGCACGCCGCCGCCAGCGCGACGACCGAGGCCATGTGGCAGAGCCTCGGGCCGCGCAGTCGCAGCCTGACCAGC CGCAATGCCTCGCGCTTCGACGTGCAGGTCAAGCAGGTCCAGGCATTGCAGGCGGCGCTGCTGGAGTTGCAGGACATGCAGGCCGGCGCGCGCCTGCTGG CCAGCCTCAACGCGCTGGCCGTGGCCGATATCGGCCAGGCCCTGCGCGACATCGACGAGCAGGCGGTGCTGCGCGAGCCGGTCGATTTCAGCCGTTGGTC GGGCGCGCCGAATTTCGGCCTGCAGGCGTTCCGCGCCCAGGACAGCGCCGAGCTGAAGCAGAGCCTGACCAGCCAGTTCAATGCCATGGCCGCGGTCGCC GAGCGCCACGCCCCGGCGCTGGAGTGGCTGCAGGCGCAGCAGTCCAGCCTGGCCACCGCCGACTACAACGCGTTCGTGCGCTTCAGCGCGCTCAACGCCG AACTGCAGAAATTCAAGGCCGACAACCCGGCGAGCACCGCGGCGCAGCTGGCGAAGCTGGTGGGTAACGATTTCAACCAGATGGACATCGGCAGTTGCGC CGACATTCTCAACGGCGTGCTCCTGCCGTCCAGCCGCAGCGACCTGGCGACGCGCCTGGTGGACCTGCGCCAGGGCGCGCTCGGGCGCTGCCAGTCGTTG CAACAGCAGCAGGCGGCGCAGGCCTGGAAGGACCTCGCCGACTACTTCAACCAGTACCTCGCCGGACGCTTCCCGTTCGCCTACAGCCTGGAAGCGGCCG ATGCCGAGCCGGGGCGGGTGCGGCACCTGCTGAAGCTGATGGAGACGCGCTTGCCGCAGGTGCGCGAAGGGCTGGCCCAGGTTCGCTCGCCGGACCTGCC GGCCGCCGAGGACTTCGTCCGCCGCCTGGAGCAGGCGCAGCGCTGGCTCGGCCCGCTGTTCGAGCGCGACAAGTCGGGCCTGCTCGGCGTCGCCCTGGAC ATCGACTGGCGCAGCGACCGCAGCCTGGAACGCGGCGCCGACCAGGTGATCGCCTGGAGCCTGTACTCGGGCGACCAGGAAAGCCGGTTCCCCGGCGCGC AGGACAAGGGCCTGACCTGGAACGTCGGCGATCCGCTGAAGATCATGCTGCGCTGGGCGAAGAACGGCTCGCAGCGTCCGGCAGACGACCCGCGCCAGGC CAGCCTGGCGGTGGCCGACCTCGAGGCCGGCTGGAGCTACCAGGGCTCCTGGGCGCTGCTGCGCATGATGCGTGCGCACTTCTCCCGGCAGCGCCCGCCG AACGTCGACTACACGGAGTTTCCGCTGGTCCTGCAACTGCCGGTGTATGCGCCCTACAGCCCGGAAAACGAGGCGCGGATGTTCCTCCGCCTGTCGTTGA TGAGCCTGGGCGGCAAGACCCCGCTGTCCATCCAGCCGCTGCCGGTGCGCGCGCCGCAATCGCCGTTCGCGACGCTGTTGCCGGCCACCGTCGCCAGCAC CGGAGGTATCCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTGCCTCTTTCCGGCAACGCCCTGTCCCTGGAAGTGCTGCTCGAACCCATCGCCCCAGAACAGCCGTGCGGCCCCAGCCTGCGCTACGACCCGGACTA CGACCGCCTGCGCGAGTTGCGCCGGGAGGACGACAGCAGCCTGCCGACCGGCGTCTGGCAGGCGGAGGCCAAGCGCGCCGACTGGGCCGCGGTGGAGCAG TTGGCCAGCGAACTGTTGCAGCGGCGCAGCAAGGACCTGATGCTCGCCGCCTGGCTCGGCGAGGCCTGGCTGCAACGCGGCGGGCTGGGCGGATTGCAGC GCGCGCTGGTGCTGCTGGCGGAACTCTGCGAGCGCTACCCCGAGGAGGTGCATCCGCAAGCCCAGGACGGCGACCAGTCGTGGCGGGTGCCGCCCATCGA CTGGCTGTTGCGCCGCTATGCCGAGCTGCTGCACACGCGCCTGCCGCTGATGGGGCAGGGCGCCTTCGCCGAGATCACCCTCTATGCCTGGCAGAGGTTG
Amino Acid Sequence
>IcmF3
MSGATLFMLVLLLLLLALLLGALGWWWRTRGGTEIRSFYAAVRQMEREQGWQGRYEAPWLLMLGNETEGEQLCATWRLLPVARPAWFGRWWSDGEGAILL VPESVFLPDEGLRRQSGAWLRLLRLFLRLRGRRALDGVVWNIPLARLQDGEQAAALGLAARRRYVELTQRLGLSLPVYVVITGLEDLPGFQELLAALPEE ARERALGWSSPFAAEAAWQSRWCEQALEEITATLTESIVELGTLRGQVNNDLYCLPPRLESLRGSLQALLEPVFQGNARGEAPRFRGLYLSGSEAAGAAS DEALPAVDAPRRRSSFASQLWARRILAEEGLAQAVPRILQLRQRWQRGIGLVALCLCLLWGGLMTWVWRDALRDAGELSQLLHGASERYQPLDDDTRRAA QVRQNVQAWWQLVAQAPRWRFTSLAFPSSWFSSLDARIDSAYRRVSERLLVRPLRSLLEGEASDLRAIRSDGQPGLKEGDDPSQWKDYLAAKDLVARATT LERHNRLFAQAIDNRKTPLDDLLQLSNDALGSSYNGGSLARLAYYNRTLFAERPADLAALDLGRVGATAADNFHDLMARWLNAYFLTDSLERTGNALTQE LAQLGQERDATAAQLLGVGELINHLQQQVNRINLIWGNGVGQDLVPGYQNLLKSAQQSSLLGDRVEELQNLTVQLQQQFRSEWIAPPEAAGDGLLVKQGA TLKLADDLLGLKRAIDDLKTKDFVSVALAGKTLAEHSLLSIDDIGVTQALSFFNDFSGYYESTLPSLNPRYRYSVLHAAASATTEAMWQSLGPRSRSLTS RNASRFDVQVKQVQALQAALLELQDMQAGARLLASLNALAVADIGQALRDIDEQAVLREPVDFSRWSGAPNFGLQAFRAQDSAELKQSLTSQFNAMAAVA ERHAPALEWLQAQQSSLATADYNAFVRFSALNAELQKFKADNPASTAAQLAKLVGNDFNQMDIGSCADILNGVLLPSSRSDLATRLVDLRQGALGRCQSL QQQQAAQAWKDLADYFNQYLAGRFPFAYSLEAADAEPGRVRHLLKLMETRLPQVREGLAQVRSPDLPAAEDFVRRLEQAQRWLGPLFERDKSGLLGVALD IDWRSDRSLERGADQVIAWSLYSGDQESRFPGAQDKGLTWNVGDPLKIMLRWAKNGSQRPADDPRQASLAVADLEAGWSYQGSWALLRMMRAHFSRQRPP NVDYTEFPLVLQLPVYAPYSPENEARMFLRLSLMSLGGKTPLSIQPLPVRAPQSPFATLLPATVASTGGIP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site