Pseudomonas aeruginosa UCBPP-PA14, PA14_30050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004451 isocitrate lyase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2634
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17319879
Biological Process GO:1900232 negative regulation of single-species biofilm formation on inanimate substrate
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2634
 ECO:0000249
sequence similarity evidence used in automatic assertion		 23363478
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51621
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019752 carboxylic acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21631
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004451 isocitrate lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21631
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other UCBPP-PA14 genes in this class
Putative enzymes Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF001362 ICL IPR006254 Isocitrate lyase 412 531 5.9E-8
PIRSF PIRSF001362 ICL IPR006254 Isocitrate lyase 290 410 7.7E-12
Pfam PF00463 Isocitrate lyase family IPR006254 Isocitrate lyase 81 269 3.5E-20
Gene3D G3DSA:3.20.20.60 - IPR040442 Pyruvate kinase-like domain superfamily 2 531 1.0E-128
PIRSF PIRSF001362 ICL IPR006254 Isocitrate lyase 1 278 7.0E-29
Pfam PF00463 Isocitrate lyase family IPR006254 Isocitrate lyase 330 399 1.3E-9
Pfam PF00463 Isocitrate lyase family IPR006254 Isocitrate lyase 429 530 2.8E-13
PANTHER PTHR21631 ISOCITRATE LYASE/MALATE SYNTHASE IPR006254 Isocitrate lyase 2 531 2.7E-130
CDD cd00377 ICL_PEPM IPR039556 ICL/PEPM domain 63 386 2.08677E-34
SUPERFAMILY SSF51621 Phosphoenolpyruvate/pyruvate domain IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily 10 514 2.42E-124

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.