Strain | Pseudomonas nitroreducens strain Aramco J contig6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGATCATGCCGGGACGGTGGTCGTGATCATGGCCAAGGTCGTCATGATCGTGGTCGTCGTGGTCCGGGTGGTTCGACTCACTGAAATCGGCAAACTTGCG CAGATGCATGCCGGCCTGGTCCTGCACGGCCACGCTGGGGCCCTTGCGGCTGTCCAGCACCTTGGGCAGGAAGTTCTCCAGGTCCGGGCCGACCCAGTAG AACAGCTGAGCATCGCGCACGCGGCGGATGTCCGAGGGGCGCAACGAGTAGCTGTGCGGCGAGGCGCCCGGCGGCAGCAGCACGTCCGGCGTCCCTTCAC CGTCCTGGATGGCAGCGGCGATCAGTTGCAGCGGCTTGATGCTGGTCAGCACGCTGACCTCGGCACGCACGGGGAGGCTGAGCAGCAGCGCGCAGCAGGC GGTCAGCAGGGCGACGGGACGGAAGGACACGGCGGCACTCACACAGGGGAGACATGAAAGAGTAATATAATAACGTCTCTGAACCCGAGCGTCGCCGCGC
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DNA Sequence for Gene |
>QX33_RS15495
ATGTACAAGATCGCCCCCAAGACTCCCCTCGCCTGCCGCCCGCACGACCACGCCAACTGCGTGGCCAGCGCCCTGGCCGACGCCGACGCGCTGTGCGCGC GCCAGGGCGTGCGCCTGACCGAGCTGCGCCGGCGCGTGCTGGAGCTGGTCTGGGCCAGTCACAAGCCGCTGGGCGCCTACGACATCCTCGCCGTGCTGAG CGAGGAAGACGGCCGCAAGGCGGCGCCGCCGACGGTCTACCGCGCGCTGGACTTCCTCCTGGAAAACGGCCTGGTGCACCGCATCGCCTCCCTCAACGCC TTCATCGGCTGCGCGCACCCGGAACACGCCCACGAAGGCCAGTTCCTGATCTGCCGCGCCTGCCACACCGCCATCGAGCTGGAACAACCGGCCATCAGCG AGGCCATCGTTGCCGGCGCCAAGGGTGTCGGCTTCGCCGTGGAAAGCCAGACCGTCGAGATCGTCGGCCTCTGCGGCGCCTGCGCGCCCGGCCAGCGGGA GGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGAGCGACGCCCTGATCCGCCTGCAAGGCGTCGGCGTCAGCTATGGCGGCCAGGCGGTGCTGCAGAACGTCGACCTGACCATCGCCCCCGGCGAGATCGT CACCCTGATCGGCCCCAACGGCGCCGGCAAGACGACCCTGGTGCGCAGCGTGCTCGGCCTGCTCAAGCCCGACAGCGGCAGCGTCTGGCGCGCGCCGAAG CTGTCCATCGGCTACATGCCGCAGAAACTCCACGTCGATCCGACCCTGCCGCTGACGGTCTTCCGCTTCCTCCGCCTGGTGCCGGGCGTACAGCGCCCCC AGGCGCTCGACGCGCTGAAGGAAGTCGGTGCCGCCCATGTGCTCGACAAGCCGCTGCAGAGTGTCTCCGGCGGCGAACTGCAGCGCGTGCTGCTGGCCCG CGCGCTGCTGCGCAAGCCGGAACTGCTGGTGCTCGACGAACCCGTGCAGGGCGTCGACGTCGCCGGCCAGGCCGAGCTGTACCGCCTGATCGGCCGCCTG
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Amino Acid Sequence |
>transcriptional regulator np20
MYKIAPKTPLACRPHDHANCVASALADADALCARQGVRLTELRRRVLELVWASHKPLGAYDILAVLSEEDGRKAAPPTVYRALDFLLENGLVHRIASLNA FIGCAHPEHAHEGQFLICRACHTAIELEQPAISEAIVAGAKGVGFAVESQTVEIVGLCGACAPGQREA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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