Pseudomonas nitroreducens Aramco J, QX33_RS14820
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas nitroreducens strain Aramco J contig6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCAGCCGTAGTCGGCGGGGTAGATGTCGCTGGTCAGGCGTTCTTCGTAGCCGTGCAACTGGTCCGGGCCGCAGAAATGCATCTTGCCCGACAGCGCGG TGCGGTAGCCCAGGCGGCGCAGGTAGTGCGCGTAGGTGGGGATGTCGGCGGCAAAATCGGCGGCGTTGTCCCAGGCGCCGATTTTGGTCGGCAACTGGCC GCTGACCAGGGTGAAGCGCGAGGGCGCGCAGAGCGGGCTGTTGCAGTAGGCCGAGTCGAACACCACGCCTTCACCGGCGAGGCGCGAGAGGTAGGGCAGC TTGATCGGCGACTGGGCGTCGTAGAAGGGCAGGAGCGGCGCGGCCATCTGGTCGGCCATGATGAAGAGAATGTTCGGGCGCTTCATGGCGTTGGGCTTAT CCTGTTGGCGCTGTTATGGGATGCTGTTGGTCATGAGTCTGTTTCCTGCTGAATACGGGGTAAAGCGCATGGCACGGCATGCTTCGGATAACGTCCACTT
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| DNA Sequence for Gene |
>QX33_RS14820
ATGCGTGAGCCAGTCTTGAGCGTGCCGCTGGAACTGCTGCGCGTGTTCGAGTCCGCGGCCCGGCTGCTGAGCTTCACCGCCGCCGCCGGTGAGCTGGGCA CCACCCAGCCGGCGGTCAGCCAGCAGATCAAGCGCCTGGAGAAGCTGCTGGCAGTGCGCCTGTTCGACCGCATCCACCGCGGCATCGCCTTGACCGAAAG TGGGCAGGTGCTGCAGCAGCACGTTCAGGCGGGGTTGGAGAGCATCGACGCCGGCATCGCTGCGGTGACCGCGAAAAACCCCCACGAAGTGCTGCAGGTC GCCACCGACTTCGCCTTCGCCGCCTACTGGCTGATGCCGCGCCTGCCGCGCTTCCGCCAGGCACACCCGGAGCTGGATGTCGGTTTGATCAGCAGTGATC GCAGCCCGATTTCCCTGCGCAGCGATATCGATGTCGCCATTGCCTTCGGTGACGGGCGCTTCAAGCATGGCGAAGCGCTGCGGCTGTTCAGCGAGGAAGT ATTCCCGGTGTGCAGCCCGCGCCTGGTGGCAGGCCGCGAACTGCCGCTGTCGCCCCAGGCGCTCACGACTCTGCCGACGTTGCACTTGAAACCCGAAGCC TCCAGCCGCTGGTTCGACTGGGCCGGTGTCTATCGCCAGTTGGGCATCGACTCGGCGCCGGGCCCGGCCGGGCTGCGTTTCGACAACTACACCCTGCTGA TCCAGGCGGCCATCGCCGGGCAAGGCGTGGCCATCGGCTGGCGGCATCTGGTCGACGAATTGCTGGAGCAGGGGTTACTGTGCCGGCCCATCGCCGGGTC GCTGCAATCGCGATTCGGCTATTACGCCGTGCTGCCGGAACGCAAACGGCGCATGCGCCTGGTGCAGCGCTTCGTCGACTGGCTGCAGGCGGAACTGGAG CAGGACCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGACACCCCGATCAAGGATTTCCACGCCCACGTCTATTTCGACGCGAGCAGCCTCGCGCGTGCCCGCGCCCTGTGCGAAGAGGCGGCCAGCCGCTTCGG CGCGAAGATGGGCCGGGTGCACGAGCGCCCGGTGGGGCCGCATCCGGACTGGAGCTGCCAGCTGGCCTTCGACAACGCCACCTTCGCCACCCTGGTGCCG TGGCTGGCGCTGAATCGCGATGGCCTGGTGATCTTCGTCCACCCCAACACGGGTGATGACCTGCGCGACCACCGCGATCACGGTCTATGGATGGGCGAAG TACGTCCGCTGGACCTCTCGCCGTTCACGAGCTGACACGTTTTTGCATTCGATAATAATTCTCGATTCGGTGTATGCTGCCGTCCCTTCGCATCGGTCGG ACAGACGTTGGCCGGTTTTTCGGGGTATTTCGGCCATCATGCGGCGCTTCGCCTCCTCCTCCCTGCTGCAGAGCTTCCAGGCGCATTACGCGGACCTGAT
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MREPVLSVPLELLRVFESAARLLSFTAAAGELGTTQPAVSQQIKRLEKLLAVRLFDRIHRGIALTESGQVLQQHVQAGLESIDAGIAAVTAKNPHEVLQV ATDFAFAAYWLMPRLPRFRQAHPELDVGLISSDRSPISLRSDIDVAIAFGDGRFKHGEALRLFSEEVFPVCSPRLVAGRELPLSPQALTTLPTLHLKPEA SSRWFDWAGVYRQLGIDSAPGPAGLRFDNYTLLIQAAIAGQGVAIGWRHLVDELLEQGLLCRPIAGSLQSRFGYYAVLPERKRRMRLVQRFVDWLQAELE QDR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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