Pseudomonas aeruginosa UCBPP-PA14, PA14_27810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01387 JCVI: heavy metal response regulator transcription factor IPR006291 Transcriptional regulatory protein CusR-like, heavy metal response 3 221 2.3E-102
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1 112 9.7E-39
Coils Coil Coil - - 116 136 -
FunFam G3DSA:1.10.10.10:FF:000005 Two-component system response regulator - - 122 223 5.4E-39
Coils Coil Coil - - 224 226 -
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 175 8.0E-39
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 119 225 1.2E-31
CDD cd19935 REC_OmpR_CusR-like - - 3 102 1.62434E-55
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 4 112 4.9E-25
Gene3D G3DSA:3.40.50.2300 - - - 1 80 1.2E-15
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 133 221 8.00257E-34
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 1 223 5.0E-55
FunFam G3DSA:3.40.50.2300:FF:000002 DNA-binding response regulator PhoP - - 1 80 4.4E-23
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 146 221 1.3E-24
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 146 221 2.4E-25
Gene3D G3DSA:6.10.250.690 - - - 81 118 1.1E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.