Pseudomonas nitroreducens Aramco J, QX33_RS08900 (relA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas nitroreducens strain Aramco J contig3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCAACTTCGCCCTGCCGCTGGCGCGCCAGGTGCGCGAAGTAGTGGGCGTGGAAGGTGTGCAGACCATGGTCGAGCGTGCTGCTGCCAATGCCCATGCCA ACGGGCTGGCCAACACCCGGTTCCATCAGGCGGACCTGACGAAACCGCTTGCCGAAGCCCCCTGGGCGGCGGAGGATTTCACCGCCGTGCTGCTCGATCC TCCGCGTGACGGAGCCTTCGAGCCGGCGCGGCAGATGCGTTCACTGGGCGCGGAGCGGGTACTCTATGTGTCCTGCAACCCGGCGACCCTGGCGCGCGAC GCTGGCGAACTGGCCCGACAGGGCTATCGCCTGAAGCGCGCCGGCATCCTCGACATGTTCCCGCAGACGGCCCATGTCGAGGCCATGGCTTTGTTCGAGG CAGGCTAGGAAGGCCTGCGCAATCCGACCGGCTCAAGCAAGAAGAAAGGCCGGCGCAGTGAGCGGTGTGTTGTGGCGCACCGTGGGGAAGGGTAGACACG
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| DNA Sequence for Gene |
>QX33_RS08900
|relA
ATGGTACAGGTGAGAGCGCATCAGCCGGTCAACACGGACGGCAGCATCAACCTCGAGGCCTGGCTGGACCATGTCCAGACCCTGGTCCCGGGCCTGGATC GCCAGGTCCTGCTGGAAGCCTGCGAGTTCGCTCGCGAGGTGGAAGACAGGGCTGTCAGCACGGCTGACAACTCCTGGGCGGATGGCACCTCCAGCTTCCA GACGGGACTGGAGATCGCCGAGATCCTGGCGGACCTGAAGCTCGACCAGGAGTCCCTGGTCGCCGCGGTGATCTACCGTGGCGTGCGCGAGGGCAAGGTC AAGCTCGAGGACGTGGCGCAGCGCTTCGGCCCTGTCGTCGCCAAGCTGATCGAAGGCGTGCTGCGCATGGCTGCGATCAGTACCAGCCTCAGCCCTCGGC AGTCGCTGGTGCTCGGCACCCAGGCGCAGATCGAGAACCTGCGCAAGATGCTGGTGGCCATGGTCGACGACGTCCGCGTCGCGCTGATCAAGCTGGCCGA GCGGACCTGCGCGATCCGTGCGGTGAAGAACGGCGACGAAGAGAAGCGCATGCGCGTCGCCCGAGAAGTCTTCGACATCTACGCCCCGCTGGCCCACCGC CTCGGCATCGGCCACATCAAGTGGGAGCTGGAGGATCTGTCCTTCCGCTACCTGGAACCCGACCAATACAAGCAGATCGCCAAACTGCTGCACGAGCGCC GGCTGGACCGCGAGCAGTACATCGCTACTGTTATGCAGCAGCTCAAGGATGCCCTGGCCGCCACCGGCATCAAGGCCGACCTGTCCGGACGCGCCAAGCA CATCTATTCCATCTGGCGGAAGATGCAGCGCAAGGGCCTGGACTTCAGCCAGATCTATGACGTGCGCGCCGTGCGCGTGCTGGTGCCGGAAATGCGCGAC TGCTACACCGCGCTGGGCATCGTGCACACCCTGTGGCGCCACATCCCCAAGGAATTCGACGACTACATCGCCAACCCCAAGGAAAACGGCTACCGCTCGT TGCACACCGCGGTGATCGGCCCCGAGGGCAAGGTGCTGGAAGTGCAGATCCGCACCCACGCGATGCACGAGGAAGCCGAACTGGGCGTCTGCGCGCACTG GCGCTACAAGGGCACCGACGTCAAGGCCAGCTCCAACCACTACGAAGAGAAGATTTCCTGGCTGCGCCAGGTGCTCGAATGGCACGAGGAACTGGGCGAC ATCGGCGGCCTGGCTGAGCAGTTGCGGGTGGATATCGAGCCCGACCGGGTCTACGTCTTCACTCCTGACGGCCACGCCATCGACCTGCCCAAGGGCTCCA CGCCGCTGGACTTCGCCTACCGCGTGCACACCGAGGTCGGTCACAACTGCCGTGGCGCCAAGATCAACGGCCGCATCGTGCCGCTGAACTACAGCCTACA GACCGGCGAGCAGGTGGAAATCATCACCGGCAAGCAGAGTGGGCCGAGCCGCGACTGGCTGAACCAGAACCTGGGCTACGTCACCACATCGCGGGCGCGA GCCAAGATCGTCCACTGGTTCAAGCTGCAGGCGCGCGACCAGAACGTCGCCGCCGGCAAGGCCATGCTCGAGCGCGAACTCGGCCGCCTGGCTCTGCCGC CGGTGGACTTCGAAAAGCTCGCCGAGAAGGCCAACTACAAGACCGGCGAAGACCTGTTCGCCGCCCTGGGCGCCGGCGACCTGCGCCTGGCCCACGTGGT CAACTACGCGCAGCAACTGGTCGAGCCCGAGCGCGGGAACGAGCAGCTCGAACTCATCCCGCGCAAGCCGAGCAAGATCGGCCATGGCAAGCGCGGCGAC ATCCAGATCCAGGGCGTCGGCAACCTGCTCACGCAGATGGCCGGCTGCTGCCAGCCGCTGCCGGGCGACCCGATCGTCGGCTACATCACCCTCGGCCGCG GCGTGACCATCCACCGGCAAGACTGCGCCACCGCACTGCAACTGGCCGGGCGCGAGCCGGAGCGGATCATCCAGGTCAGCTGGGGCCCGGTGCCGGTCAG CACCTACCCGGTGGATATCGTCATCCGCGCCTACGACCGTTCCGGCCTGTTGCGCGACGTCTCGCAGATGCTGCTCAACGAGCGCATCAACGTGCTGGCG GTGAATACCCGCTCGGACAAGGAAGACAACACCGCGATCATGCGCCTGACCATCGAGATTCCAGGTCTCGATTCGCTGGGCCGCCTGCTGGCGCGCATCT CCCAGTTGCCCAACATCATCGAGGCGCGGCGTGATCGCGCGGGTGCCAAGGATGCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTCGAAGACCTGCTGTACCTCATGGCCCGCCTGCGTGACCCGCAGAACGGTTGCCCCTGGGACCTCAAGCAGAGCTATGCGACCATCGTCCCCTACACC CTCGAGGAAGCCTATGAGGTCGCTGATGCCATCGAGCGCGGCGACTTCGACCACCTGCGCGAGGAGTTGGGCGACCTGCTCTTCCAGGTCGTCTACTACG CGCAGCTGGCTCGTGAAGAGGGCCGCTTCGAGTTCGACGCAGTGGTCGACGGCATTACCACCAAGCTGATTCGCCGCCATCCCCATGTCTTCCCTGACGG CGACCTCTACGGCGAGCCGGACCCAGCGAAGCTGGAGGAAGCGGCGGTCAAGCAGCGTTGGGAAGAGTTGAAAGCCGAGGAGCGCGCCGCCAAGGCCGCG GAGCCGGTGCAGTTGTCGCTGCTGGACGATGTGCCCAACGCGCTGCCAGCGTTGAGCCGCGCTGCCAAGCTGCAGAAGCGCGCCTCCCAGGTCGGCTTCG
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| Amino Acid Sequence |
>(p)ppGpp synthetase
MVQVRAHQPVNTDGSINLEAWLDHVQTLVPGLDRQVLLEACEFAREVEDRAVSTADNSWADGTSSFQTGLEIAEILADLKLDQESLVAAVIYRGVREGKV KLEDVAQRFGPVVAKLIEGVLRMAAISTSLSPRQSLVLGTQAQIENLRKMLVAMVDDVRVALIKLAERTCAIRAVKNGDEEKRMRVAREVFDIYAPLAHR LGIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDREQYIATVMQQLKDALAATGIKADLSGRAKHIYSIWRKMQRKGLDFSQIYDVRAVRVLVPEMRD CYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAELGVCAHWRYKGTDVKASSNHYEEKISWLRQVLEWHEELGD IGGLAEQLRVDIEPDRVYVFTPDGHAIDLPKGSTPLDFAYRVHTEVGHNCRGAKINGRIVPLNYSLQTGEQVEIITGKQSGPSRDWLNQNLGYVTTSRAR AKIVHWFKLQARDQNVAAGKAMLERELGRLALPPVDFEKLAEKANYKTGEDLFAALGAGDLRLAHVVNYAQQLVEPERGNEQLELIPRKPSKIGHGKRGD IQIQGVGNLLTQMAGCCQPLPGDPIVGYITLGRGVTIHRQDCATALQLAGREPERIIQVSWGPVPVSTYPVDIVIRAYDRSGLLRDVSQMLLNERINVLA VNTRSDKEDNTAIMRLTIEIPGLDSLGRLLARISQLPNIIEARRDRAGAKDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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