Pseudomonas nitroreducens Aramco J, QX33_RS30155
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas nitroreducens strain Aramco J contig23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAAACCTTCGGCCCGCTGGCGCCGGTGTTCCGCTTCAAGGACGAGGCAGAAGTCATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCTTCGTACTTC TACGCCCGCGACCTGGCCCGCGTGTTCCGCGTTGCCGAGCAGCTGGAATACGGCATGGTGGGTATCAACACCGGCCTGATCTCCAACGAAGTGGCGCCGT TCGGCGGCATCAAGGCCTCCGGCCTGGGTCGCGAAGGTTCGAAGTACGGCATCGAGGACTACCTCGAAGTCAAATACCTCTGCCTCGGCGGTATCTGATC CGTTTTTTCCGTGGGCGCGAGGTGGCAGGCAAGAGCTGACAGCCACCTTCGCGTCGGCGTTTTCCGGTGGTAGCACCGGACAACCCGTCTGGCGGGCCGC AAGTTCCACGACAGTCGATCATCGTATGCTGTCGCGTGAGGCTTCTCCCCCGCTTTCATCCTTTGATCCGGTCGCCCGATGAGCGGCCACTGAGGAAGCT
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| DNA Sequence for Gene |
>QX33_RS30155
ATGAGCAAAACCAACGAATCCCTGCTGCAACGTCGTCAGGCCGCCGTACCGCGCGGTGTAGGCCAGATCCACCCGGTCGTCGCCGAGCGCGCCGAGAACT CCACCGTGTGGGACGTCGAAGGTCGTGAATACATCGACTTCGCCGGCGGCATTGCCGTACTGAACACCGGTCACCTGCACCCGAAAGTGATCGCTGCCGT TCAGGAGCAACTGACCAAGCTGTCCCACACCTGCTTCCAGGTGCTGGCGTACGAGCCCTACATCGAGCTGGCTGAAGAAATCGCCAAGCGCGTTCCGGGC AACTTCCCGAAGAAGACCCTGCTGGTCACCTCCGGCTCCGAAGCCGTTGAGAACGCCGTCAAGATCGCCCGTGCCGCTACCGGCCGCGCTGGCGTGATCG CCTTCACCGGTGCCTACCACGGCCGTACCATGATGACCCTGGGCCTGACCGGCAAGGTCGTTCCTTACTCCGCGGGCATGGGCCTGATGCCGGGCGGCAT CTTCCGCGCCCTGGCTCCGTGCGAACTGCACGGCGTGAGCGAAGACGAGTCGATCGCCAGCATCGAGCGCATCTTCAAGAACGACGCTCAGCCGCGCGAC ATCGCTGCCATCATCATCGAGCCGGTTCAGGGCGAGGGTGGCTTCTACGTCAACTCCAAGGCCTTCATGCAGCGCCTGCGCGCCCTGTGCGACGAGCACG GCATCCTGCTGATCGCTGACGAAGTGCAGACCGGCGCTGGCCGTACCGGCACCTTCTTCGCCACCGAGCAACTGGGCATCGTCCCGGACCTGACCACCTT CGCCAAATCCGTTGGCGGCGGCTTCCCGATCTCCGGCGTTGCTGGCAAGGCCGAGATCATGGACGCCATCGCTCCGGGCGGCCTGGGCGGCACCTACGCC GGTAGCCCGATCGCTTGCGCCGCGGCCCTGGCCGTGCTGAAAGTGTTCGACGAAGAGAAGCTGCTGGACCGTTCGCAAGCCGTTGGCGAGCGCCTGAAGA CTGGCCTGCGCGACATCCAGGCCAAGCACAAGGTGATCGGCGACGTTCGTGGCCTGGGTTCGATGATCGCCATCGAACTGTTCGAAGGCGGCGATCACAA CAAGCCGGCCGCTGAACTGGTCAGCAAGATCGTGGTTCGTGCCCGTGAGAAAGGTCTGATCCTGCTCTCCTGCGGTACCTACTACAACGTGATCCGCTTC CTGATGCCCGTCACCATCCCGGACGCGCAGCTGGACAAAGGCCTGGCCATCCTGGCCGAGTGCTTCGACGAACTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTTCATCGCCCTAGCCGTTCAGGAGAAAGGCCCGCGCAAGCGGGCCTTTCTTTTTGTGCGCTTTTTTTTGTGAGAATTGTCCTCCGAAGTTGATGGCGC GCATGGGAAGCCTGAGGGCTTTGGACTACGCTGCGCAGTATCCGTAGGCCGCTGGCCGGCGGCATCCGAAGGACCGGGCACTCGGCAGGGGAGGCTCTGG ATCGGTTGTTTCCGCCCGCGACGGCATTCGTCCCGAACGAGGTGTGATCCATGAGCGTTTCTCCCGGCGTGCTGGTGGCTGCCAGCGATCCCTGGAGCCG CGAGCTGCTCGGCCAACTGGTGCTGAGCGTGCGCTGCGATGCGAACGTCGAATTCTGCGAAGACGGTGACACGGCCATCGAGGCCTGTCGCCGCCATCCC TTCGCCTTGATCCTGGCCGAGCGCGAGCTGCCCGGCAGCGACGGGCTGGAGCTGCTGCGTCATGTGCGCTTGCGCCGTCGCGGGCCGGTTGCCCAGCCTT
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| Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNESLLQRRQAAVPRGVGQIHPVVAERAENSTVWDVEGREYIDFAGGIAVLNTGHLHPKVIAAVQEQLTKLSHTCFQVLAYEPYIELAEEIAKRVPG NFPKKTLLVTSGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALAPCELHGVSEDESIASIERIFKNDAQPRD IAAIIIEPVQGEGGFYVNSKAFMQRLRALCDEHGILLIADEVQTGAGRTGTFFATEQLGIVPDLTTFAKSVGGGFPISGVAGKAEIMDAIAPGGLGGTYA GSPIACAAALAVLKVFDEEKLLDRSQAVGERLKTGLRDIQAKHKVIGDVRGLGSMIAIELFEGGDHNKPAAELVSKIVVRAREKGLILLSCGTYYNVIRF LMPVTIPDAQLDKGLAILAECFDELA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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