Pseudomonas nitroreducens Aramco J, QX33_RS05830
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas nitroreducens strain Aramco J contig2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGGCTACGGCCCAGTGCCGGCGGTGCGCAAGCTGCTGCAACGCCTGGAACTGGATATCCACGCCTTCGACGTGATTGAGCTGAATGAGGCCTTCGCCGC CCAGGGCCTGGCCGTGACCCGCGACCTGGGCCTGGCCGACGACAGCGACAAGGTCAACCCCAACGGCGGCGCCATCGCCCTCGGCCACCCGCTGGGCGCC AGCGGCGCGCGCTTGGTGCAGACTGCTCTACATCAGTTGGAAAAGTCCGGTGGTAAGTTGGGCCTGGCGACCATGTGCGTGGGTGTGGGACAGGGACTTG CCCTGGCCATCGAACGCGTTTGACCCGGGCATCCGGTAAGAGGGATCTGTGGTAGGGGCTTTAACCGAGGCGGCTCTGAAGCGTCGCCGCTGAAGCTCCT CCCACGAGCTACAATGGTGCGCCGTGTGCACCATCCACAAGAACTGCCACGTTGATGCGACACTAGGCCTGACGCCAATTTTCCCGGGGAACCCTTGCTC
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| DNA Sequence for Gene |
>QX33_RS05830
GTGAGTAACCAACTCTTCGATGCCTACTTCACTGCTCCGGCCATGCGTGCGCTGTTCTGCGACGCCGGCCGGGTGCAGGGCATGCTCGACTTCGAGGCTG CCCTGGCCCGCGCCGAGGCGCGCGTGGGGCTGATCCCGGCCGAGGCCGTCGCGTCCATCGAGGCCGCCTGTGTGGCCGAACTCTACGATTTTTCCGCACT GGCCCAGGCCATCTCCACGGCCGGAAACTCTGCCATCCCGCTGGTCAAGGCGCTGGGCAGGCGCATCGCCGCCAGCGATGCCGAGGCCGAGCGCTACGTG CATCTTGGCGCCACCAGCCAGGACGCGATGGACAGCGGCCTGGTGCTGCAACTGCGCGCCGCTATCGGCCTGCTGGAGCAGGATCTCGCCACTCTCGGTG ATGCCCTGGCCGTGCAGGCCGAGCGCCATGCCGACACGCCGCTGGCCGGGCGTACCTGGCTGCAGCAGGCCACGCCGGTCACCCTCGGCATGAAGCTGGC CGGCGTGCTCGGCGCCGTCACTCGACATCGCCAGCGTCTGGCCGAACTTAAGCCGCGCCTGCTGTGCCTGCAGTTCGGCGGCGCCTCCGGCAGCCTGGCC GCACTGGGCGAACAGGCCTGGCCGGTGGCCGAGGCGCTGGCCGAGGAACTGCAGTTGAACCTGCCCGAGCAGCCCTGGCATACCCAGCGCGACCGCCTGG CGGAATTCGCCGGCCTGCTCGGGTTGATCGCCGGCAGCCTGGGCAAGCTCGGCCGTGACCTCAGCCTGCTGATGCAGACCGAGGTGGGCGAAGTCTTCGA GCCTTCCGCGCCGGGCAAGGGCGGCTCGTCGACCATGCCGCACAAGCGCAACCCGATCAGTGCCGCCGTGCTGATCGGCGCCGCTACCCGCGCGCCGGGT CTGGTCGCCACCATGTTCGCCTCCATGCCGCAAGAGCACGAGCGCAGCCTCGGCCTGTGGCACGCCGAATGGGAAACCCTGCCGGAGCTCTGCTGCCTGG TGTCCGGCGCCCTGCAGCAGGCGCTGTTGGTGGTACCCGGGCTAGAGGTGGATGCCGCGCGCATGCGCAACAACCTCGAATTGACCCAAGGCCTGGTGCT GGCGGAGGCGGTTAGCATCGCTCTGGCCCAGCGCATCGGCCGCGACGCCGCCCATCACCTAGTCGAGCAGTGTTGCCGCCAGGCGGTGAAGGAGGGCACT CATCTGCGCGCCGTGCTCGGCGCCAATGCTGTAGTCAGCGCCGAACTCAGCGCCGCTGAGCTGGATCGCCTGCTCGATGCGGCTCATTACCTCGGCCAGG CCCGCCGCTGGGTGGCGCGGGCCGTTGCCGAACACAGAAGCCTTCTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGCCTTGCATGCCTGCCGTACGCCTCGCCGATGGCGATCTGAACTACCTGCTCGAAGGCCCGGCCGGTGCGCCGGTGCTGGTGCTGTCCAACTCGCTGG GCACCGATCTACATATGTGGGACGCGCAGATAGCAGCCTTCACCCAGCACTTCCAGGTGCTGCGCTATGACACCCGTGGCCATGGCCGCTCGTTGGTCAG CGCGGGCCCCTACAGCATCGAACAGAATGGCCGCGACGTGCTGGCGCTGCTCGACGCGCTGGATATTGCCAAGGCGCATTTCTGCGGCCTGTCCATGGGC GGCCTGATCGGCCAGTGGCTGGCGATCAACGCGCCCGAACGCATCGAGCGCTTGGTGCTGTGCAACACCGCCGCCAAGATCGGTACCCCGGAAGTGTGGA ACCCGCGCATCGACACGGTGCTGGCCGGGGGCGAGCAGGCGATGCGCGAGCTGCGCGACGCCTCGATCTCGCGCTGGTTCACCGCGGAGTTTGCCGAAGC
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| Amino Acid Sequence |
>3-carboxy-cis,cis-muconate cycloisomerase
MSNQLFDAYFTAPAMRALFCDAGRVQGMLDFEAALARAEARVGLIPAEAVASIEAACVAELYDFSALAQAISTAGNSAIPLVKALGRRIAASDAEAERYV HLGATSQDAMDSGLVLQLRAAIGLLEQDLATLGDALAVQAERHADTPLAGRTWLQQATPVTLGMKLAGVLGAVTRHRQRLAELKPRLLCLQFGGASGSLA ALGEQAWPVAEALAEELQLNLPEQPWHTQRDRLAEFAGLLGLIAGSLGKLGRDLSLLMQTEVGEVFEPSAPGKGGSSTMPHKRNPISAAVLIGAATRAPG LVATMFASMPQEHERSLGLWHAEWETLPELCCLVSGALQQALLVVPGLEVDAARMRNNLELTQGLVLAEAVSIALAQRIGRDAAHHLVEQCCRQAVKEGT HLRAVLGANAVVSAELSAAELDRLLDAAHYLGQARRWVARAVAEHRSLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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