Pseudomonas nitroreducens Aramco J, QX33_RS04350
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas nitroreducens strain Aramco J contig2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTGCCGGGCGGCCAGCTACATCACTGTAGTGGGTGTCGCCGTCGCGCAAGGCGGAAACGGCGGCATCGGTGATGAAGTCCGGGGTTGCGAAATCGGGGT CGCCGACGCTGAGCACTATCACGTCGCGGCCGGCGCGTTGGGCGGCAATGGCGGCGTAGTGAATATCCCAGGCGGCAACGCCGGGTCCGACCATCCTGTC CACAAGCGACGAATAACGCATGCAAGGGCCTCATCCGAATGACGGAATGTCCTGCAGAAGGGTCCGCAGGAGCGTTGGGCCACCATAGCCAAGGATGAAC GAGTGTTCAACAGCGTTTTCCGACATCAGACATGTCGTTTTCAGACCGTTCACTCACCCCCCCTCCAACCTTCGGGTGCTGCTTGTCGCATGTTCGACCG ACGAACGGAATCACGACATCCACTTAACGGCTTCTTAACGATCACCCCCGTAGCGTTCTCTCACCCCCTGACAGAGCCGCCATGGCCTTTGGAACACCAC
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| DNA Sequence for Gene |
>QX33_RS04350
ATGGAAATGCCCTTCCTCCCCTTCTCCCGTCCCAGCATCGGTGAAGAAGAGATCCAGGCAGTCAACGAAGTCCTGCGTTCGGGCTGGATCACCACCGGGC CGAAGAACCATGAACTGGAACAACGCTTCGCCGACTCCATCGGTTGCCGTCACGCGGTGGCCCTGTCGTCGGCCACCGGCGGCATGCACCTGGCGCTGCT GGCCCTGGGCATCGGCCCGGGCGACGAGGTGATCACCCCGTCGCAGACCTGGGTCTCCACCGTCAACATTATCAGCCTGCTGGGCGCCACGCCGGTGTTC GTCGATGTCGACCGTGACACCCTGATGACCGACGCCGCGCGCATCGAAGCCGCAATCACCCCGCGCACCCGCGCCATCATTCCGGTGCATTACGCCGGCG CGGCCTGCGACATGGACCCGATCAACGAGCTCGCCCTGCGCCACGGCATCCCGGTGATCGAGGACGCCGCCCACGCGGCCGGCACCTTCTATCGCGGCCG CCCGGTAGGCTCGCGCGGCACCGCGATCTTCTCCTTCCACGCGATCAAGAACCTCACCTGCGCCGAGGGCGCCATGTTCGTCACCGACGACGAGGCCCTG GCCAACCGCGTGCGCACCCTGAAGTTCCATGGCCTGGGCGTGGATGCCTACGACCGCCTGACCCACGGCCGCAAGCCGCAGGCGCAGGTGGTGGAACCGG GCTTCAAGTACAACCTCACCGATATCAACGCCGCCATCGCCCTGGTGCAGTTGCCCAGGCTCGAAGCGATCAACGCCCGCCGCGCCGAACTGGCCGCCGG CTACGCCAGTCGCCTGGCGCACCTGCCGGTGCAACCGCTGGCGCTGCCGGACTACCCGCAGCACCACGCCTGGCACCTCTACGTCCTGCGCATCGACCAG GAGCGCTGCGGCATCGACCGCGACGCCTTCATGCAGGGCCTGCAGGAGCGCGGCATCGGCAGCGGCATCCACTTCATCGGCAGCCACCTGCACAGCTACT ACCGCCAGCGCTACCCGGATGTGCACCTGCCCAACACCGAGTGGAACGCCTCGCGGATCGTCTCCATCCCGCTGTTCCCCGACATGACCCAGGCCGACCA GGACCGCGTGGTCGACGCCATCGAAACCCTGCTTCGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCACCGTGAAAGCCTATCCGATCAACCGTGTGTCCATCGTCATCCCGGTGTACAACGAAGAGGCCAGCCTCCCCGAGCTGCTGCGCCGCACCACCGCC GCCTGCGAACAACTGGGCCGCGATTACGAGATCGTGTTGATCGACGACGGCAGCCGCGACAGCTCCGCCGACCTGCTGCAGGAAGCCGCCGAAGCGCCCG GCAGCCATGTGGTGGCGGTGATCCTCAACCGCAACTATGGCCAGCACGCGGCGATCATGGCCGGCTTCGAGCAATGCCAGGGCGACCTGGTGATCACCCT CGACGCCGACCTGCAGAACCCGCCGGAGGAAATCCCGCGCCTGGTCGAAGAAGCCGCCAAGGGCTACGACGTGGTCGGCAGCGTGCGCCAGCAACGCCAG GACTCGGCACTGCGTCGCTGGCCGTCGAAGCTGATCAACCTCGCCGTGCAGCGCTCCACCGGCGTGGCGATGAACGACTACGGCTGCATGCTGCGCGCTT
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| Amino Acid Sequence |
>UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
MEMPFLPFSRPSIGEEEIQAVNEVLRSGWITTGPKNHELEQRFADSIGCRHAVALSSATGGMHLALLALGIGPGDEVITPSQTWVSTVNIISLLGATPVF VDVDRDTLMTDAARIEAAITPRTRAIIPVHYAGAACDMDPINELALRHGIPVIEDAAHAAGTFYRGRPVGSRGTAIFSFHAIKNLTCAEGAMFVTDDEAL ANRVRTLKFHGLGVDAYDRLTHGRKPQAQVVEPGFKYNLTDINAAIALVQLPRLEAINARRAELAAGYASRLAHLPVQPLALPDYPQHHAWHLYVLRIDQ ERCGIDRDAFMQGLQERGIGSGIHFIGSHLHSYYRQRYPDVHLPNTEWNASRIVSIPLFPDMTQADQDRVVDAIETLLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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