Pseudomonas nitroreducens Aramco J, QX33_RS23925 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas nitroreducens strain Aramco J contig13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGTGCTTCAGGCACTGCTGCAGGAACAGGTGCCGGTACGCGATATCCGCACCATCGCCGAGGCCATCGCCAACGTGGCGGCGAAGAGTCAAGATCCCGC CGCGATGGTGGCGGCGGTTCGCGTCGCGCTGTCCCGCGCAATCGTGCAAACCATTGTGGGACTAGAGCCGGAGCTGCCTGTGATCACTCTGGAACCCAGG TTGGAACAGATATTGCTCAATAGTCTTCAGAAGGCCGGACAGGGCTCCGAAGACGGCATGTTGCTGGAACCCGGAATGGCCGAAAAGCTGCAACGCTCGA TGGTTGAAGCGGCGCAGCGTCAGGAGATGCTCGGCAAGCCGGCGATTCTGCTGGTGGCGGGTCCCATCCGCGCGATGATGTCGCGATTCACCCGGATGGC GGTTCCCACCATGAACGTGCTGGCTTACCAGGAAATCCCGGACAACAAACAAGTCACGATTGTCGCCACTGTTGGGCAGAACTGATTGAGGTCCTAGGCC
|
|
| DNA Sequence for Gene |
>QX33_RS23925
|flhF
ATGCAGGTAAAACGCTTCTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTCCGTGACGAGCTGGGCCCGGATGCCTCGATCATCGGCAACCGCCGTG TCGCCGGCGGCGTGGAGCTGACCGCCGCGCTGGATTACCAGGCACCGGTGGCCGCCAGCAAGCCGAACCCGGCGCTGGAAGCCGAGCTGCGCAAGACCCA GGCGAAGATCGCCCAGGCCAAGGCGGACCTGTCGGCCCCGGCCCGCGCAACCGATGGCGTGCGCAAGGACCGTCAAATGTACGGCACCGAAGCGCCGCGC CGCAGTGCTGCCGAGACCCTGGCCGAAGCCATGGCCGCGCCGGCCACCCCGACGCCGGCTGCCGCCGGCCAGCAGGCGCTGGAAGCCATGCGCTTCGAGC TCAACGGCCTGCGTGAACTGATTGAAGTGCAACTGGGCTCCATCGCCTGGAACCAGCTGCAGAACCAGCGCCCGAAGCAGGCCAACCTGTGGCGTCGCCT GCAGCGCATGGGCCTGCCGGCCGACCTGTCGCGCAGCCTGCTGGAGCGCGTAGCCTCCATCGCCGATCCGAAGCAGGCCTGGCGCATGCTGCTGGCGCAC CTGGCGCGCTCGATCAACACCCCGGAAACCGACCTGCTGGAGCAGGGCGGCGTGATCGCCCTGGTCGGCCCGGCCGGCATGGGCAAGACCACCACCCTGG CCAAGCTGGCTGCCCGCTACGTACTCAAGTACGGCGCGCAGAGCATTGCCCTGGTGTCCATGGACAGCTTCCGCATCGGCGCCCAGGAGCAGATCAAGAC CCTGGGCCGTATCCTCAATGTGCCGGTGACCCTGGTCGATCCTGGCCAGTCGCTGATCCAGGCCATGGCGCCGCTGGCGCGCAAGCGTCTGGTGCTGATC GACACCGCCGGCCTGCCGGCCAACGATCCGGCGCTGCGCATGCAGCTCGAAGCGCTGTCGTCGCTGAGCCTGAACGTGAAGAATTACCTCGTGCTGGCCG CGACCAGCCAGAGCCAGGTGCTCAAGTCCGCCTGGCAGAACTATCGTTCCTGTGGGCTGGCCGGGTGCATCCTGACCAAGCTGGACGAAGCGGGAAGCCT CGGCGAAGCTCTGGCTCTGGCTATCAGCCAGCATCTCCCGGTAGCCTATCTGGCTGACGGGCCGAAGATCCCGGATGACCTGCATGTGGCACGCGCGCAC CAACTGGTCAGCCGTGCGGTGAGCCTGCAGTCGCCGGAAGAGCCCAGCGAGGACGCCATGGCCGACATGTTCGCCGGCCTTTACCAGCAGCCGGTGCGTC GCGCCAGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGATTGTGAGCCCCGGGTGGGGCGTGGGGCGGCCGGTTGGGCCGCCCAAGCGATGCGGATGCTCTGCAAGATGATCCGCGAGCACCGGAAGCGGTGGAGC ACCGCAGCCGGATTAGCCGGAACGCCAGAAGCGTGACGGTCGAACGACGAGACAAGGTATTGATATGGGCATGCATCCCGTTCAGGTAATCGCAGTCACC GGTGGCAAGGGTGGCGTGGGCAAGACCAACGTGTCGGTGAATCTGTCGCTGGCGCTGGCCGATCTTGGTCGCCGCGTCATGCTGCTGGACGCCGACCTTG GCCTGGCCAACGTCGACGTGCTGCTGGGCCTGTCGCCCAAGCGCACGCTGGCCGACGTGATCGAAGGCGAATGCGACCTGCGCGACGTGATCCTCCAGGG GCCCGGCGGCATCCGCATCGTCCCGGCGGCCTCGGGCACCCAGAGCATGGTGCACCTCACGCCGATGCAGCATGCCGGTCTGATCCAGGCTTTCAGCGAC
|
|
| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGPDASIIGNRRVAGGVELTAALDYQAPVAASKPNPALEAELRKTQAKIAQAKADLSAPARATDGVRKDRQMYGTEAPR RSAAETLAEAMAAPATPTPAAAGQQALEAMRFELNGLRELIEVQLGSIAWNQLQNQRPKQANLWRRLQRMGLPADLSRSLLERVASIADPKQAWRMLLAH LARSINTPETDLLEQGGVIALVGPAGMGKTTTLAKLAARYVLKYGAQSIALVSMDSFRIGAQEQIKTLGRILNVPVTLVDPGQSLIQAMAPLARKRLVLI DTAGLPANDPALRMQLEALSSLSLNVKNYLVLAATSQSQVLKSAWQNYRSCGLAGCILTKLDEAGSLGEALALAISQHLPVAYLADGPKIPDDLHVARAH QLVSRAVSLQSPEEPSEDAMADMFAGLYQQPVRRAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|