Pseudomonas nitroreducens Aramco J, QX33_RS21670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas nitroreducens strain Aramco J contig11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCCACCTGCTGCGCCCGCGCCTGATCGGCTACGCGGCAGTGCTGCTGGTGATGATCGGCGCGTTCATCTGGGCGCTGGAAGCCCGGCCGCTGATCAACC TCGACGTCGCCCGCGACCGTGGCCTGTTCCGCGAGAACGCCGCCGGCGAGATCGAGAACATCTACAACCTCAAGCTGATCAACAAGACCCAGCAACCGCA GCACTACCAGCTGAGCCTCGCCGATGGAGCCGGCTACCGCCTGCAAGGCGTGCCGGAACTGATGCTGCAGCCGGGCGAGATCCGCGACTTCGCCGTCTCG GTCGCCAGCGAAGCGCAGAGCAGCGCCGGTGGTTCGCTGCCGCTGCACTTCAGGATCAGCGACGGCCATGAAGCCATCGACGCCGCCAGTACCTTCGTCT CGCCGAGGCGCTGAGCATGGCACGGGAGCTTGGCGTGACCTCGGCGCAACGCCTAGAGTGGGCGGATTCCACCACCGCCCAGGGCGCCCCGCAGGACAAG
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| DNA Sequence for Gene |
>QX33_RS21670
ATGAAGCGCTACGAGAAATTCGCCGACGAGATCGCCGGCCTGATCCGCAGCGGCGTACTCGCCCCCGGCCAGAAAGTCCCCTCGGTGCGGCACGCCAGCC GCACCTACGGGGTCAGCGCTTCGACGGTTTTCCAGGCGTATTACCTGCTGGAGGACCGAGGCCTGATCGTCGCCCGCGCGCGCTCCGGCTACTTCGTCCG CGAGCACGTGCAGCGCGCCCTGGCCGAGCCGGAAATCGCCCGCCACGACGCGCAGACCACCGAGGTGGACGTCAGCGAACTGGTGTTCTCGGTGCTCAGC TCGATCAAGGACCCGGACACCGTGCCGTTCGGCTCGGCCTTCCCGGCGCCGGAGTTGTTCCCCCTGCCGCGCCTGGCGCGCTCCATGGCACACGCTGTGC GCGACATGGACCCGCGTTCGGTGGTGGCTGACCTCGCCCCCGGCAGCCACGCCCTGCGCCGGCAGATCGCCCTGCGCTACATGGTCGGCGGCATGCCGCT GCCGGTGGAGGAACTGGTGGTCACCAACGGCGCGCTGGAAGCGCTCAACCTGTGCCTGCAGGTGGTGACCCAACCCGGCGACCTCGTGGCCATCGAAGCC CCGGCCTTCTACGCCAGCCTGCAGGTGCTGGAACGGCTGAAACTGAAAGCGGTTGAGATCCCCGTGCACCCGCGCGAAGGCATCGACCTCGACGTGCTCG CCGACAGCCTGGCGCGCCTGCCGATCAAGGCCTGCTGGTTCATGAGCAACTTCCAGAACCCGCTGGGCGCCAGCATGAGCGAGGAGAAGAAACGCGCCCT CGCCGCCCTGCTGACCCGGCACCAGGTGCCGCTGATCGAGGACGACGTCTACGCCGAGTTGTACTTCGCCGCCCAGGCGCCCAAGCCGGTGAAGGCCTTC GACACCGAGGGCCTGTTCATGCATTGCAGCTCCTTTTCCAAGAGCCTGGCGCCCGGTTACCGCGTGGGCTGGGTGGCTGGCGGGCGCTACGCCGAGCAGA TCGAGCGGCTCAAGCTGATGACCAGCCTGTCGGCGTCGGTGCCAGCCCAGGCGGCCATCGCCGACTACCTGCAACACGGCGGCTACGACCGCCACCTGCG CAAGCTCCGCCACGCGCTGGAAAGCCAGCAGCACGCGATGCTCGCCGCCGTGGCCCGGCACTTCCCCGCCGCCACCCGCGTCACCCGCCCCAGCGGCGGC TACTTCCTCTGGCTGGAACTGCCCGAGCAGATCGACGCGCTCAAGCTGTTCCAGCTCGCCCACGCCCAGGGCATCAGCCTCGCACCCGGGCCGATCTTCT CGGCGACGCGGCGCTTCGGCCACTGCCTGCGCCTGAACTACGGGCATCCATGGACCGCCACCAGCGAACAGGCGATGGAGACCCTGGGACGGATCATCCA CTCGCTGCAGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGTTCGGACTGCAGGACTGATCCGCACATTCGGAAACGATCTGTATCTGTGCGGCAAGTTGTCGCAGGAATACCCTGTCAGGCATGAAACCCGGACAAG GGACGCTGCCATGGACGCGGAAGGCCTGATGATCTTGCTCACGGTGGGCGCCGCGTTCGGCGTGCACCTCGGGGTGCGTTGGTACCTGCAGCGCGGGATG CTGCCACGCGGAGAACGCTGGCTGGCCTGAATTTTCTGGGATTGCCCGGCGGACGTTGCTATACAGACAGCGCCCACTGACCCTCCACGGACGGCCCAAT GAATCTCTGGCAGCGCGACCTCAGCCATTCCCCCTATGCCGAACGGGTCCGCGCCGAACAGTTCGACGTGCTGCGGCGCAACTCGCCCTTCTCCATCATT GCCGCCTACCTGGTCGCCGGCCTCACCACCTGGGTGCTCAACGGCGCGCTGCCGCTGGAGTCGCTGCTGGCCTGGCTCGCCGCGCAAACCCTGCTGGGCG
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYEKFADEIAGLIRSGVLAPGQKVPSVRHASRTYGVSASTVFQAYYLLEDRGLIVARARSGYFVREHVQRALAEPEIARHDAQTTEVDVSELVFSVLS SIKDPDTVPFGSAFPAPELFPLPRLARSMAHAVRDMDPRSVVADLAPGSHALRRQIALRYMVGGMPLPVEELVVTNGALEALNLCLQVVTQPGDLVAIEA PAFYASLQVLERLKLKAVEIPVHPREGIDLDVLADSLARLPIKACWFMSNFQNPLGASMSEEKKRALAALLTRHQVPLIEDDVYAELYFAAQAPKPVKAF DTEGLFMHCSSFSKSLAPGYRVGWVAGGRYAEQIERLKLMTSLSASVPAQAAIADYLQHGGYDRHLRKLRHALESQQHAMLAAVARHFPAATRVTRPSGG YFLWLELPEQIDALKLFQLAHAQGISLAPGPIFSATRRFGHCLRLNYGHPWTATSEQAMETLGRIIHSLQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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