Pseudomonas aeruginosa UCBPP-PA14, PA14_23830 (fimV)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48452
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other UCBPP-PA14 genes in this class
Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 269 283 -
NCBIfam TIGR03504 JCVI: FimV/HubP C-terminal domain IPR020011 Motility protein FimV, C-terminal 880 923 6.6E-21
MobiDBLite mobidb-lite consensus disorder prediction - - 140 176 -
MobiDBLite mobidb-lite consensus disorder prediction - - 237 259 -
MobiDBLite mobidb-lite consensus disorder prediction - - 380 394 -
MobiDBLite mobidb-lite consensus disorder prediction - - 237 312 -
MobiDBLite mobidb-lite consensus disorder prediction - - 372 445 -
MobiDBLite mobidb-lite consensus disorder prediction - - 411 445 -
SMART SM00257 LysM_2 IPR018392 LysM domain 175 230 0.0037
Coils Coil Coil - - 319 367 -
MobiDBLite mobidb-lite consensus disorder prediction - - 799 858 -
NCBIfam TIGR03505 JCVI: FimV/HubP N-terminal domain IPR020012 Motility protein FimV, N-terminal 182 254 4.0E-30
SUPERFAMILY SSF48452 TPR-like IPR011990 Tetratricopeptide-like helical domain superfamily 526 607 4.81E-5
Gene3D G3DSA:1.20.58.2200 - IPR038440 FimV, C-terminal domain superfamily 863 924 1.9E-27
Gene3D G3DSA:3.10.350.10 LysM domain IPR036779 LysM domain superfamily 163 238 1.6E-10
Coils Coil Coil - - 486 506 -
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 547 626 3.9E-6
CDD cd00118 LysM IPR018392 LysM domain 175 229 3.25445E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.