Pseudomonas aeruginosa UCBPP-PA14, PA14_23690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACGATATCCAGCGTCACCTCGGGATGCTGCGCGAGGAACTCGGGCACCAGCGGCAGCAGGAAATGATGTCCGAAAGGCACGTTGGCGTTGACTCGCAAGC GCCCGCGCGGCGCCGCGTTTTCGCTCGCACACCGCTCGGCTTCCTCCAGGTCGGCCAGGATACGCACCCCGCGCTCGTAGAACGTGCATCCCTCGGGCGT CAGTTGCAATTGACGGGTGGAGCGGTTCAGCAAGCGGGTTCCCAGGCGCTGTTCGAGCCGGGTGATCAGCTTGCTGACTGCCGAGGGCGTCATGCCGCAA CGTCGAGCGGCGGCGGAAAAGCCCCCCGACTCGACGACCCGGGCAAACACCTCCAGTTCGCCGGAACGGTTGACTTCAAGCCGGGCCATGGCGCCCTGCC TGATGATTTCGCTTCATAAATGATGTTCCCCGCGACGGTCTATTTCCCTTAAATCTTTGAATTCATCATCAGCTACAGGATAACCACTGAATTCAACGAC
|
|
| DNA Sequence for Gene |
>PA14_23690
ATGAAACGACCCATCGAAAGACTTCCCGCCGCGACCTCCAGCGCAACCCGGGCCTTCGCGCTCGCAACGAGCCTGTTGTACGCCTGCGCCGCGCCGGCCG CTTCCTGGACCGCCAGCTGGCAGGCCAGCCCGCAGCCGGTCTGGGCTGAGGACTTCCTGTTTCCCAGCAACGTGCCGGCCGAACTGCACGACCAGACGGT GCGGCAACTGGCGCGAATCAGCCTGGGAGGAACGCGCGTGCGCATCGTCCTGGCAAATACCTATGGAAAGCGCCCGATCCGGATCGGCCGGGCCACCCTG GCCAAACCGGGTTCCGAGCGCGCCGCGGTCGCCACCGGCAGCCGGCATGACGTGACCTTCGGCGGACGCCGGACGGCGACCATCGCGCCCGGCGCCACGC TACTCAGCGATCCGGTGACGATGCCGGTGGCCGCGCTCTCGCAGGTGCTGGTGAGTCTCTACCTGCCGGCCGCCACGCCCATGGAAACCTTCCACTGGGA CGGCCGCCAGACGGGCTGGATCGTCGCCGGCGAGCAGACCCAAAGCCACGCATTGCAGCTGGACGCGGCGGACAGCCAGAGCACCACCGCGCGCCTGCTG TTGACAGGTATCCTGGTCGAAACCGAAACGGCAACGCGGACGCTGGTGACGCTCGGCGACTCGATCACCGACGGAGCCAGCGCCAGCCTCGACCGGAACA GCCGTTGGCCGGACTTCCTCGCCGAACGCCTGGCCCCGCATGGCGTCGCCGTGGTCAATGCGGGGATTTCCGGCGCCCGTCTGCTGAGCGACGGCATGGG CGCGAGCGCGCTGGCACGTCTGGACCGCGACGTACTGGCCCAGCCAGGCGCAAGCAGCATGGTGGTGATGCTCGGCATCAACGACATTGCCTGGCCCGGT ACCGCTTTTGCCCGGAATGCCGCACCGCCCACCCTGGAAGCGCTGATCGCCGGCTACCGGCAATTGATCGAACGGGCGCACAACCGGGGTATCCGGGTCG TCGGCGCGACCCTCACGCCGTTCGAGGGCGCACTGCCCGGCACGCCGTTGAGCGATTATTACCATCCCGCCAAGGAAGCCCTGCGCAGGCAGGTTAACGA GTGGATCCGTCATGCCGGCGCCTTCGATGCGGTGATCGACTTCGACGCGGTATTGCGCGATCCGAAGCAGCCGTCGCGGCTCGCCGCGCGCTACGACTCC GGCGACCATCTGCACCCCAGCGACGAAGGCAACCGAGCGATGGCGGCCGCCATCGACCTCGACGTCCTGCTGGACGAGGTGCCTGACGGCACACCGGCAG AGCCCCGGGCCGATAGCGCAACGAAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAAAAGGCGCCCGAAGGCGCCTTTTTTCGATCACCGCTGACGGTTACTGGTTGTCCAGTGCCGGGCGCTGGCCATTGATGGCGATACGCTTCGGCTTGGC TTCTTCCGGAACCAGCCGGACCAGGTCGATGTTCAGCAGGCCGTTGGCTAGCGAAGCCGCCTTGACCTCGATATGGTCGGCGAGGCGGAACGACAGCTTG AAGGCGCGCTGGGCGATGCCCTGGTGCAGGTAGGTCACGTTGTCCGTGGACTTCTCGCGCTTGCCGCCACTGACGGTCAGCACGCCGCGCTCGACCTGCA GGTCCAGGTCTTCTTCCTGGAAGCCGGCGGCGGCGATGACGATGCGATACTCGTCGTCACCGTGCTTTTCGACGTTGTAGGGCGGGTAGGTACTCCCGGC CTCATTGCGCAGGGCCGACTCGAACAGATCGTTGAAGCGATCGAAGCCTACGGAATGACGGAACAGCGGGGCGAGGGAAAAAGCGTTGCTCATTGCGAAT
|
|
| Amino Acid Sequence |
>secreted protein
MKRPIERLPAATSSATRAFALATSLLYACAAPAASWTASWQASPQPVWAEDFLFPSNVPAELHDQTVRQLARISLGGTRVRIVLANTYGKRPIRIGRATL AKPGSERAAVATGSRHDVTFGGRRTATIAPGATLLSDPVTMPVAALSQVLVSLYLPAATPMETFHWDGRQTGWIVAGEQTQSHALQLDAADSQSTTARLL LTGILVETETATRTLVTLGDSITDGASASLDRNSRWPDFLAERLAPHGVAVVNAGISGARLLSDGMGASALARLDRDVLAQPGASSMVVMLGINDIAWPG TAFARNAAPPTLEALIAGYRQLIERAHNRGIRVVGATLTPFEGALPGTPLSDYYHPAKEALRRQVNEWIRHAGAFDAVIDFDAVLRDPKQPSRLAARYDS GDHLHPSDEGNRAMAAAIDLDVLLDEVPDGTPAEPRADSATK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|