Pseudomonas aeruginosa UCBPP-PA14, PA14_21060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATACACGCCGACCCGGCCGCGCCGCTCCGGCGGCGGCAGCAGGCCGCGGTCCTGGTAGGCACGCACGTTGCGCACGCTGCTGCCGGCCGCGCGCGCCAGT TCGTCGACACTGTATTCGCGGGCATCCTCGGCGGACGGCTGCTCGCCACGTTGCAGCAGGCGCTGCAGGAGGGTCAGGGGTGTGCTCATGGAGGCGGATC ATAACGAGGCCCGCCGAACGGCCACAACCTCCGGGGGTGCAACGCTCTTTGCCGGCGTCGGGATGCGCGGGCGCCAACCAAAGACTGGACTCGTCGGTCA GCCGCTCCTCCGGCACCGCCGCCACAACCCGGGGGAAACGTCCCGAGCCTTCTGCCCCGGGCCTTCCGGCGCCGGTAGCAAGTGCCGTAACACCGGCGTG AAGAGACTTCCCAGGGCTGGCGCAACGCCTGCTTATGGGCCAGCATCAACCATGACATCAATCAATGTCACAATAACGACAAGCCAGCCTGGAGAGAGCC
|
|
| DNA Sequence for Gene |
>PA14_21060
ATGTCCCAAGGCGCCTGGGTACCCACTCCCGACGATCTCGATCACTTCCGCCAGGTCCAGCGACTGGCCTATACCTGCTGCGAAACCATCCACGGCGAAC TGCGCCCCGGCATCAGCGAGAGGGAAGCCGCGGCGCTGATGAAGACCTGGTTGCAGGATCACGGCGTCGACGACTGGTTCCACCAGCCCTTCGCCTGGTT CGGCAGCCGCACCTCGTTCAAGGGCTTCGACGGCCTGCGTCATCTCGGTGGCTTCAACCTGGCCTTCTACCCCGGCAAGCAGCGCCTGGAGGAAGGCATG CCGTTCATCCTCGACTGCGCGCCGACCCTCGGCGCCTATACCGCCGATGTCGGCTACTCCGGCGCGCTCGGCCACAACCTGTTGCAGGAGCGGCTGATGG ACGACCTGCTGATACACCGACGCACCATCCTCGACCTGGTCCGCGAACGGCGCCCCCTGGCCGAAGTCAGCCAGGCGGTCGACCGGCTCTGCGTGATCCA GGGCACCCTGCCACGGCACAAGGCCTATCCCTTCGAAGTGCTCGCCCATCGCGTGGAAAAGCTCGGCAACCGCCGCGGTCCCTCGGTGGCGCGCTTCGGC GTGCGCAACCTGTACACCCTGACGCGCAACGCGCTGGTCACCGGCAAGCGCGAAGGCTGGTCGCCGCTGTGGTCCAGCGGCAAGCGCTCCGAGCACCCGC CGACGCCCGGTCTCTGGGCGGTGGAACCGCACCTGGGGCTACGCGGGGTGGGCGCCAAGTTCGAGGAACTGCTGGTAGTCACCGAAGACGACGCCTACTG GCTCGACGACGACCTGCCGCACGTCCGCCGCTGGCAGGCGCGCGGCCTGCTGCCGCAAGCACGGGAGGCCGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGCGCTCCTCGCCCTCCCCGACCTGCAGCCGGAACGGCTGTTCGTGCAGTCCGGCGACGTGCGCCTGGCGGTTCATTGCTGGGGCGCGCCGGACAACGA CAAGCCGACGCTGCTGATGGTGCATGGCTACCCGGACAACCACGAGACCTGGCTGCCGCTGATCCGCCAACTGGCTGGGCGCTACCGCATCGTCGCCTAC GACGTGCGCGGCGCCGGCGCTTCGGACAAGCCACGCTGGAGCCGCGACTACCACCTGCAACGGCTCAGCGAAGACCTGCAGGCGGTGATTCGCGCCACCA GCCCGGATCGCCCGGTGCACCTGCTGGCCCATGACTGGGGCTCGATCCAGACCTGGGAAAGCGTCACCGATCCGCAGTGCCGCCCGCTGATCGCGTCCTA TACCTCGATCTCCGGGCCCTGCCTGGACCATGTCGGCTTCTGGATGCGCGAACACCTCAGGCAGCGCAGTCCGAAGGCCCTGAAAGCGGTATTCGGCCAG
|
|
| Amino Acid Sequence |
>hypothetical protein
MSQGAWVPTPDDLDHFRQVQRLAYTCCETIHGELRPGISEREAAALMKTWLQDHGVDDWFHQPFAWFGSRTSFKGFDGLRHLGGFNLAFYPGKQRLEEGM PFILDCAPTLGAYTADVGYSGALGHNLLQERLMDDLLIHRRTILDLVRERRPLAEVSQAVDRLCVIQGTLPRHKAYPFEVLAHRVEKLGNRRGPSVARFG VRNLYTLTRNALVTGKREGWSPLWSSGKRSEHPPTPGLWAVEPHLGLRGVGAKFEELLVVTEDDAYWLDDDLPHVRRWQARGLLPQAREAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|