Pseudomonas aeruginosa UCBPP-PA14, PA14_17860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCGCCTGCCGCAAGCCGCTGATCGCCGCCGTGGAGGGCCATGCCCTGGGCGGAGGCTGCGAGTTGGCGATGCACTGCGACCTGATCGTCGCCGGTGCCT CGGCGCGCTTCGCCCAGCCGGAAATCCGTGTCGGCGTGATGCCCGGCGCCGGCGGCACCCAGCGCCTGGTGCGAGCGGTGGGCAAGTTCCAGGCGCTGCG CATGCTGTTTACCGGTTGCACGGTACGGGCGCCGGAGGCCCTGGCCATAGGGTTGGTCAGCGAGGTGGCGGCGGATGGCCAGGCATTGGATCGCGCCCTC GAACTGGCTCGCCAGATCGCCGGCCTGCCGCCGCTGGCGCTGGCGCAGATCAAGGAAGTGGTCCTGGCCGGCGCCGACCTGCCGCTGGACCAGGCCCTGG CGCTGGAGCGCAAGGCCTTCCAGTTGCTGTTCGACAGCCACGACCAGAAGGAGGGCATGCGTGCCTTCCTGGAAAAACGCACAGCGGAGTACCTGGGAAA
DNA Sequence for Gene
>PA14_17860
ATGAGCGAGCCATCGATCGTTCTCATCGGTATCGTCGGTACCGGTGCCATGGGCCAGGGCATCGCCCAGCTCGCTGCCTGTGCCGGGCTGTCGGTGCTGC TCTACGACAGCCGCCAGGGGGCGGCGCTGCAAGCGCGCGAGCAGATCGCCACGGTCCTTGCCCGGCAGGTGGAGCGGGGCCGGCTGGAGGCGGAGGCTGT CGAGCGCGCGATGGGCAATCTGCGGGTGGTCGAGGACTTGCGGGTCCTACGCGGCTGCCAGTTGGTGATCGAGGCGATCGTCGAGAACCTGGAGGCCAAG CAGGCGTTGTTCCGCCAATTGGAAGAGGTGGTCGGCGACGAAGCGATCCTCGCCAGCAATACCTCCTCGCTGTCGGTTACCGCGATCGCCTCGGCCTGTC GCGATCCCGGCCGGGTCGCCGGTCTGCACTTCTTCAATCCGGTGCCGCTGATGCGTCTGGTGGAGGTGATCGACGGTCTCGCCACCCGCACCGGCATCGC CGAGCGACTGTGCGCCCTGGTGGCGACCTTCGGCCACCAGGCGGTGCGTGCCACGGACAGCCCCGGCTTCATCGTCAACCATGCCGGACGGGCCTTCGGC ACCGAGGCGCTGCGTATCCTCGGCGAGGGCGTGGCGCCGGTGGCGGCGATCGACGAAGTCCTGCGCGAGGGCGCCGGCTTCCGCATGGGCCCGTTCGAGC TGTTCGACCTGGTCGGGTTGGACGTCAGCCTGCCGGTGATGGAGTCGATCTACCGGCAGTACTACGAGGAGCCGCGTTATCGTCCGCATCCCTTGCTGCG CCAGATGCTCGCCGCCGGCCGCCTGGGGCGCAAGAGCGGCCAGGGCTTCTACCGCTACGACGGCGCTGGGCAGGTGCCCGCCGCCGCCCCGGCGGTTGCG CCAGGCGCGGCGTTGCCGCCGGTGTGGCTGGGCGTCGACGACGAACATGACCGCGCGCCATTGCTGACGTTGCTACAACGTCTGGGCGCCGAGGTGGAGA GTGGCGAGCGTCCTTCCGGGGCGGCGTTGTGCCTGCTTGCGCCGCTGGGCGCCGACGTCAGCGCCGCAGCGCGGCGGTTCGCCGTCGATCCGACGCGCAG CCTGGCCATCGACGTGCTGTCGGACCTGGAGCGACACCGCTGCCTGATGGCCTGCCCGGCGACCCGAGCGGAGCTGCAGCAGGCCGCTCGCACCCTGTTC GCACGGGACGGCGTGGGCGTCACGCTGATTCGCGACAGCGCCGGGTTCATCGTCCAGCGCACCCTCGCCTCGATCGTCAATCTCGCCTGCGACATCGCCC AGCAGGGTATCGCTTCGGTGGAGCACATCGACCTGGCGGTGCGCCTCGGTCTCGGCTATCCGCTGGGGCCGCTGGAGTGGGGCGACCGACTGGGCGCCGG GCGCGTGCTGCGCATCCTCGAACGCCTGCATGCGCTCAGCGGCGACCCGCGCTATCGCCCCAGTCCCTGGCTGCGCCGGCGCGCCCAACTGGGCCTTTCC CTGCGCCAGCCGGACAGCCCGTTGGCCTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCTTCGCGGAGAAACACACCATGCTCGATGCCTATATCTACGCCGGCCTGCGTACGCCTTTCGGCCGGCATGCCGGTGCACTCTCGACGGTGCGTCCG GACGACCTGGCCGGCCTGCTGCTGGCGCGTCTCGCGGAAACCTCCGGGTTCGCCGTCGACGACCTGGAGGATGTGATCCTCGGTTGCACCAACCAGGCCG GCGAAGACAGCCGCAACCTGGCGCGCAACGCGCTGCTCGCAGCCGGCCTGCCGGCGCGGCTGCCTGGGCAGACGGTCAACCGCTTGTGTGCCAGCGGACT GTCGGCGGTGATCGACGCGGCGCGCGCGATCAGTTGCGGCGAGGGCCGGCTGTACCTGGCCGGCGGCGCCGAAAGCATGTCCCGGGCGCCGTTCGTCATG GGCAAGGCGGAGAGCGCCTTCAGCCGCACGCTGGAGGTCTTCGACAGCACCATCGGCGCGCGCTTCGCCAACCCCAGGCTGGTCGAGCGCTATGGCAACG
Amino Acid Sequence
>3-hydroxyacyl-CoA dehydrogenase
MSEPSIVLIGIVGTGAMGQGIAQLAACAGLSVLLYDSRQGAALQAREQIATVLARQVERGRLEAEAVERAMGNLRVVEDLRVLRGCQLVIEAIVENLEAK QALFRQLEEVVGDEAILASNTSSLSVTAIASACRDPGRVAGLHFFNPVPLMRLVEVIDGLATRTGIAERLCALVATFGHQAVRATDSPGFIVNHAGRAFG TEALRILGEGVAPVAAIDEVLREGAGFRMGPFELFDLVGLDVSLPVMESIYRQYYEEPRYRPHPLLRQMLAAGRLGRKSGQGFYRYDGAGQVPAAAPAVA PGAALPPVWLGVDDEHDRAPLLTLLQRLGAEVESGERPSGAALCLLAPLGADVSAAARRFAVDPTRSLAIDVLSDLERHRCLMACPATRAELQQAARTLF ARDGVGVTLIRDSAGFIVQRTLASIVNLACDIAQQGIASVEHIDLAVRLGLGYPLGPLEWGDRLGAGRVLRILERLHALSGDPRYRPSPWLRRRAQLGLS LRQPDSPLAS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site