Pseudomonas aeruginosa UCBPP-PA14, PA14_14500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR04407
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR04407
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03739 Lipopolysaccharide export system permease LptF/LptG IPR005495 Permease LptG/LptF-related 5 352 1.4E-66
NCBIfam TIGR04407 JCVI: LPS export ABC transporter permease LptF IPR030922 LPS export ABC transporter permease LptF 2 353 3.8E-118
PANTHER PTHR33529 SLR0882 PROTEIN-RELATED IPR005495 Permease LptG/LptF-related 1 354 4.4E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.