Pseudomonas aeruginosa UCBPP-PA14, PA14_12090

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016829	lyase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_02071	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0042834	peptidoglycan binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:3.30.70.1070	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell division Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF03330	Lytic transglycolase	IPR009009	RlpA-like protein, double-psi beta-barrel domain	101	189	6.6E-26
Pfam	PF05036	SPOR domain	IPR007730	Sporulation-like domain	264	333	5.9E-11
CDD	cd22268	DPBB_RlpA-like	-	-	100	190	8.32795E-55
PANTHER	PTHR34183	-	-	-	7	332	4.7E-84
FunFam	G3DSA:2.40.40.10:FF:000003	Endolytic peptidoglycan transglycosylase RlpA	-	-	99	192	4.1E-47
Gene3D	G3DSA:3.30.70.1070	Sporulation related repeat	IPR036680	Sporulation-like domain superfamily	262	335	1.2E-10
NCBIfam	TIGR00413	JCVI: septal ring lytic transglycosylase RlpA family protein	IPR012997	Rare lipoprotein A	102	194	3.9E-43
SUPERFAMILY	SSF50685	Barwin-like endoglucanases	IPR036908	RlpA-like domain superfamily	103	197	3.42E-12
Gene3D	G3DSA:2.40.40.10	-	IPR036908	RlpA-like domain superfamily	100	193	1.2E-38
Hamap	MF_02071	Endolytic peptidoglycan transglycosylase RlpA [rlpA].	IPR034718	Endolytic peptidoglycan transglycosylase RlpA	7	192	25.64949
SUPERFAMILY	SSF110997	Sporulation related repeat	IPR036680	Sporulation-like domain superfamily	264	336	3.79E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.