Pseudomonas aeruginosa UCBPP-PA14, PA14_06600
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGGCAGCGAGATCGCCCGCAACACCGTGGAGGCCCGTTCGCCCCAGGCCGAGCAGATGGTCGAGCTGACCCGCGGCAAGCTCGAGGCGCAGAGCGGC GCCCGGGTCATCGAGGTAGCCGACGAGACCCTCGGCACCCTGATCGACACCCACGCCTGACTCCCTGGCGGCCGGCAGCGGTCGCCCCCGACTCTTTCTT TTCCGACTGTCACCCGGCGGCCCCTGAAGCCTGCCGGGCGCTTCGCCATGGGCTTTACTGAGAGAGACGAAAGCGCTTTGGATGGTCGTTGCAGCCAGTG ATTTCGGGCATGACCGAGCGGTCGGTTCGGATGCTTGACAAGGGATTGGCGTAAACGTATGTTTCAAACGCCTGTTTGAGAGTCGGGACGCATGAGTGCG TCCGGCAAGGCGACCGGGAGCGATCCCGCACTGCGACCGCAGACTCTGGACATCCGTCCGGTCGCCGATTAACCAGAACCCTTCGTAGAGGTTGACTGCT
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| DNA Sequence for Gene |
>PA14_06600
ATGCCTGATTACAAGGCCCCCTTGCGTGATATCCGTTTCGTTCGCGACGAGCTGCTGGGCTACGAAGCGCACTACCAGAGCCTGCCGGGCGCCGAAGACG CGACTCCCGACATGGTCAACGCCATCCTCGAGGAAGGTGCGAAGTTCTGCGAACAGGTGATCGCTCCGCTGAACCGCGTTGGCGACCTGGAAGGCTGCAC CTGGAGCGCCGACGGCGTGAAGACCCCGACTGGCTTCAAGGAGGCCTACCAGCAGTTCGTCGAAGGCGGCTGGCCGAGCCTGGCCCATGACGTCGAGCAC GGCGGCCAGGGTCTGCCGGAATCCCTCGGGCTGGCCATCAGCGAGATGGTCGGCCAGGCCAACTGGTCCTGGGGCATGTACCCGGGCCTGTCCCACGGCG CCATGAACACCCTGCATGCCCACGGCACCGCCGAGCAGCAGGCGACCTACCTGACCAAGCTGGTCTCCGGCGAGTGGACCGGCACCATGTGCCTGACCGA GCCGCACTGCGGCACCGACCTGGGCATGCTGCGCACCAAGGCCGAGCCGCAGGCCGACGGCAGCTACAAGGTCACCGGCACCAAGATCTTCATCTCCGCC GGCGAGCACGACATGGCCGACAACATCGTCCATATCGTCCTGGCCCGCCTGCCCGACGCCCCGCAGGGCACCAAGGGCATCTCGCTGTTCATCGTGCCGA AGTTCCTGCCCAACGCCGAAGGCAACGCCGGCGAGCGCAACGCGGTTTCCTGCGGCTCCATCGAGCACAAGATGGGTATCCACGGCAACGCCACCTGCGT GATGAACTTCGACGCCGCCACTGGCTTCCTGATCGGCCCGCCGAACAAGGGCCTGAACTGCATGTTCACCTTCATGAACACCGCTCGCCTGGGTACCGCG CTGCAAGGCCTGGCCCACGCCGAAGTCGGTTTCCAGGGCGGCATCGCCTATGCTCGCGAGCGTCTGCAGATGCGCTCGCTGACCGGTCCGAAGGCGCCCG AGAAGCCCGCCGACCCGATCATCGTGCATCCTGACGTGCGCCGCATGCTGCTGACCATGAAGGCCTTCGCCGAAGGCAATCGCGCGATGCTGTACTTCGC CGCCAAGCAGGTCGACATCGTCCAGCGCAGCCAGGACGAAGAGCAGAAGAAAGCTGCCGACTCGATGCTGGCCTTCCTCACGCCGATCGCCAAGGCGTTC ATGACCGAAGTCGGCTTCGAATCCGCCAACCACGGCGTGCAGATCTTCGGCGGCCACGGTTTCATCGCCGAGCACGGCATGGAGCAGAACGTCCGCGACA GCCGCATCTCGATGCTGTACGAAGGCACCACCGGCGTTCAGGCCCTCGACCTGCTGGGCCGCAAGGTGCTGATGACCCAGGGCGAGGCGCTGAAGGGCTT CACCAAGATCGTGCACAAGTTCTGCCAGGCCAACGAAGCCAACGAAGCCGTCAAGGAATTCGTCGCTCCGCTGGCACAGCTGAACAAGGAGTGGGGCGAC CTGACCATGAAGGTCGGCATGGCCGCCATGAAGGATCGCGAGGAAGTCGGCGCCGCTTCGGTGGACTACCTGATGTACTCCGGCTACGCCTGCCTGGCCT ACTTCTGGGCCGACATGGCGCGCCTGGCCGCCGAGAAGCTGGCCGCCGGCACCGGCGAGGAAGCCTTCTACAAGGCCAAGCTGCAGACCGCGCGCTTCTA CTTCCAGCGCATCCTGCCGCGTACCCGCGCCCACGTCGCCGCCATGCTGTCCGGCGCCAACAACCTGATGGAGATGGCCGAGGAAGATTTCGCCCTCGGT TACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGCACGGGCCGCTGGCGGCCCGTTCCCCAGGTGAGAAAGAGCCCGCCCTTCGGCGGGCTTTTTCATGCCTGCGATCCGCTGCATCCTGGCCTTCCGACC TCGGGGTTATGGCGTTGCATTCAGCGTCCGCAGCGTGATTGTAGGCGCCCGCCCGGCGCAGTAGCTTCGAGGGATTCGCGCCTGTGGGGCGCCCCTGCCG AGGAGAACAGAGATGCCGGAATACAAGGCTCCGCTGCGCGACATGCGCTTCCTGATCGATGAGGTATTCGACTTCCATGGGCGCTACCAGGCGCTCGGCG CCAGCGACGCGACCCCGGACATGGTGGCGGCGATCCTCGATGAAGGGTCGAAATTCTGCGAACAGGTTCTGGCGCCGCTGAACCGCTCCGGCGACGAAGA GGGCTGCCACTTCGACAACGGCGTGGTGACCACGCCCAAGGGTTTCAAGGAAGCCTATGCACAGTACGTCGAGGGTGGCTGGAACGGTGTCGCCAGCGAT
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| Amino Acid Sequence |
>acyl-CoA dehydrogenase
MPDYKAPLRDIRFVRDELLGYEAHYQSLPGAEDATPDMVNAILEEGAKFCEQVIAPLNRVGDLEGCTWSADGVKTPTGFKEAYQQFVEGGWPSLAHDVEH GGQGLPESLGLAISEMVGQANWSWGMYPGLSHGAMNTLHAHGTAEQQATYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISA GEHDMADNIVHIVLARLPDAPQGTKGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGNATCVMNFDAATGFLIGPPNKGLNCMFTFMNTARLGTA LQGLAHAEVGFQGGIAYARERLQMRSLTGPKAPEKPADPIIVHPDVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQKKAADSMLAFLTPIAKAF MTEVGFESANHGVQIFGGHGFIAEHGMEQNVRDSRISMLYEGTTGVQALDLLGRKVLMTQGEALKGFTKIVHKFCQANEANEAVKEFVAPLAQLNKEWGD LTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADMARLAAEKLAAGTGEEAFYKAKLQTARFYFQRILPRTRAHVAAMLSGANNLMEMAEEDFALG Y
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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