Pseudomonas aeruginosa UCBPP-PA14, PA14_02370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGTCCTCCCACTGGTCGTGGGCGCGTACCCGGCGTACCTGTTCGGGCGTGCGCAGGCGTTGCGCCTCCAGCACCGCGCCGAGATCGGCGACGGCCGCAGC CGAGTTCGCCGCCGGCGGCGGCGGAAGGTAGTCGGCCAGGCGCGGTGGGTGGGCCAGCGGATAGGGCGCGGCGGCGGTCTCCCCGAGACAAGACAGCGGT GCGAGCAGCGAAAGGCAGAGCAAGAGCGAAGGGCATAGGGTCTTGTTGTTCATGAAGCGTATTCCCTGAGGCGAGGTTGCATCGGGAGCCTAGGCTCCCG CCCACGGCCGTTGCGGATGACGGCCGACGCCACACTCTCCGTCGGTGACTTCCGAAATGCTTGACCCGGCCTGCCGTTGCACATGCCAGCCCCTGCCAAT GGCAGGCCCCGGCAAAAGCCGAGGCAGGGAAACACAAGCGGCCTGCGGAGCGACTTCCGAGACTGCGCCCACCTGGCACTCAGGTGGGAGAAAACAATAA
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| DNA Sequence for Gene |
>PA14_02370
ATGCAAAATCTCAGACGCGCTGTATTCGCCGGCCTGGTCGCCGGCACGCTTTCCGAAGGGGCGGCCGCGACGGCCGGGGATGGGGGCTTCGTCGAGGACA GCGAACTGCAGTTCCTCGCCCGCACCTACTACTTCAACCGCGACTACCGCGACAGCCCGAACAACGCCGGGCGCAACCGCTTCAAGCCCAGGAGCGAGCG CAACGGCTACCGCGAGGAAACCACCCAGGGCCTGCGCCTCCAGTTCGCCTCCGGCTACACGCCGGGCAGCCTCGGCTTCGGCCTCGACGCCCATGCCATG CTCGGCCTGCAACTGGACAGCGGCGGCGGCCGCACCGGCACCGGCAACCTGCCGGTCGGCGCCGACGGCCATCCCGACCATCGCTACGGCAAGGTCGGCG GCGCCCTCAGGCTACGCCACGGCGAAACCCGCCTGAAGTACGGCCAGACCACCACCAGCGCGCCGGTGTTCGCCGCCAGCAGCAACCGCACGCTGTCCGG CATGGCCTACGGCCTGCTGCTGGAGGATCGCTCGTTCGACGGGCTGCTGCTCGAGGGCGGGCGCTTCACCGCCGCCTCCGGCCCCGGCGAATCCAAGGTC CGTGGCGACATCAGCACCGTCTACGGACGCCTCGGCGCCTATCCGGTGCGCCTCGACGCGGTCGGCTTCCTCGGCGGTCAATGGCAGGCCACGGAGCGGC TGCAACTGTCGCTCTACGCCTCGCGCTTCGACGACATCTGGCAGCAGGCCTATTTCGGCGCCAGCCATCGCCAGCCGCTGGGCGGGGAGCGCGCGCTGCG GGTCGACCTCGACGCCTACCGCACCCGCGACAGCGGCCAGAGCCGCTTCGGCCGCATCGACACCCTGGCCAGCTCCCTGGCCCTGGGCTACGAACAGGGA CCGCAGCGCATCACCCTGGCCTACCAGCGTGTCCACGGCGAGCAGCCGTTCGACTACATGGCCTTCGGCGACGGGCGCTCCAGCGCATCCATGGTACTGG CCAACTCGGTGGGCTACTCCGACTTCAACGGACCGGGCGAGCGTTCCTGGCAATTACGCTATGACCTGGACCTCGGCGCGCTCGGCCTGCCTGGGCTCAG CCTGCACGCGCTGCATGCCCGCGGCCGTGCCGGGGCCAGCGCCAGCAGCGCCGCCGAGAGCATCTACGCCGGACTCTACGGGCGTGACGGGCGGCACCGG GAAAGCGACCTCGGCTTCGCCTACCGGGTCAAGGCGGGCCCCCTCGCCGGCCTCGCGCTGCGCACCTCGCAGGCCTGGCACCGGGGCAACGCGAGCTATC TCGACGGCGACATCGACGAAACCCGGCTGGTCGTCGATTACTCCCGCTCGATCTGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCCCGGGCCGCGGCTCGGCGTCACTCCGCCGCCTGCGCCACGGCCTTGGCCTTCGCCAGCTTGCCGGCCGCCTCCAGCAGTTCCGGCGCGGCCCACTG CTCGGCGCTGAATTCGCGACGGATCAGGCCGAAACGCTTGGCCGCCTGGATCGAAGCATCCAGCCGGCCAAGGAAATCGGCGTCCAGGCGCGGCGACAGG GCGTCGCCCAGCTTGCGGCCACGGTACTCGCTCTGCAGGATCACCACCGGGTAGCTGGCCTGCTTCGACACCAGTTCGATGTAGGCGTCGCGGTTCTCCT CGCGGGCCAGCCAGTCCTGGGCCTGCAACTGCACCTTGAGCAGCCGCTCGGTGATGTCCGGATGGGCATCGACGAAAGCCCCGGAGCCGACCAGCAGCGC CTGCAGGGTGCCGGCGCCGTTCAAGTCGCGGGTGCTCAGCGGAATTTCCGCGAGCCCGCGGTCGCGCAGGGCGAACAGTCCGGCCAGGCCCCAGGTGGCA
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| Amino Acid Sequence |
>porin
MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYYFNRDYRDSPNNAGRNRFKPRSERNGYREETTQGLRLQFASGYTPGSLGFGLDAHAM LGLQLDSGGGRTGTGNLPVGADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAASSNRTLSGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKV RGDISTVYGRLGAYPVRLDAVGFLGGQWQATERLQLSLYASRFDDIWQQAYFGASHRQPLGGERALRVDLDAYRTRDSGQSRFGRIDTLASSLALGYEQG PQRITLAYQRVHGEQPFDYMAFGDGRSSASMVLANSVGYSDFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGASASSAAESIYAGLYGRDGRHR ESDLGFAYRVKAGPLAGLALRTSQAWHRGNASYLDGDIDETRLVVDYSRSIW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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