Pseudomonas aeruginosa UCBPP-PA14, PA14_01110 (vgrG1a)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACCAACGCCGGCACCGAGATGATCGCCAGCCTCTGCGCCGATCCGGAACTGATGCCCGAGCCGGAAGCCATCGCCAAGTCGCTGCGCGAACCGCTGCTG AAGATCTTCCCGCCGGCGCTGCTCGGCCGCCTGGTGACCATCCCCTACTACCCGCTCAGCGACGACATGCTCAAGGCCATCTCGCGCCTGCAACTGGGGC GGATCAAGAAGCGCGTGGAGGCGACCCACAAGGTGCCGTTCGAGTTCGACGAGGGCGTCGTCGACCTGATCGTCTCGCGCTGCACCGAGACCGAGAGCGG CGGCCGGATGATCGACGCGATCCTCACCAACACGCTGTTGCCGGACATGAGCCGCGAGTTCCTCACCCGCATGCTCGAAGGCAAGCCGTTGGCCGGGGTA CGTATCAGTAGCCGCGACAACCAGTTCCACTACGACTTCGCCGAGGCCGAGTGACAACCGGCGACACGCAGAGCAGTAGAAGGAACCGTCGATGGGATTG
|
|
| DNA Sequence for Gene |
>PA14_01110
|vgrG1a
ATGCAACTGACCCGCCTGGTCCAGGTGGATTGCCCGCTGGGGCCGGACGTGCTGCTGTTGCAGCGCATGGAGGGACGCGAGGAACTGGGACGGCTGTTCG CCTACGAGCTGCACCTGGTATCGGAAAATCCCAACCTGCCGCTGGAGCAGTTGCTCGGCAAGCCGATGAGCCTGTCGCTGGAGCTGCCCGGCGGCAGCCG GCGCTTCTTTCACGGTATCGTCGCGCGCTGTAGCCAGGTGGCCGGGCACGGCCAGTTCGCCGGCTACCAGGCCACCCTGCGGCCCTGGCCGTGGCTGCTG ACGCGCACCTCGGACTGCCGCATCTTCCAGAACCAGAGCGTGCCGGAGATCATCAAGCAGGTGTTCCGCGACCTCGGCTTTTCCGATTTCGAGGATGCCC TCACGCGCCCCTACCGCGAGTGGGAATACTGCGTGCAGTACCGCGAGACCAGCTTCGACTTCATCAGCCGGCTGATGGAACAGGAGGGCATCTACTACTG GTTCCGCCATGAGCAGAAGCGCCACATCCTGGTGCTCTCCGACGCCTACGGCGCGCATCGCAGCCCGGGTGGCTACGCCAGCGTGCCGTACTACCCGCCG ACCCTCGGCCATCGCGAGCGCGACCACTTCTTCGACTGGCAGATGGCACGCGAGGTCCAGCCCGGTTCGCTGACCCTCAACGACTACGACTTCCAGCGCC CCGGCGCGCGCCTGGAGGTGCGTTCGAACATCGCCCGGCCGCACGCGGCGGCCGACTACCCGCTGTACGACTATCCCGGCGAATACGTGCAGAGCCAGGA CGGCGAGCAGTACGCGCGCAACCGCATCGAGGCGATCCAGGCGCAGCACGAGCGCGTGCGCCTGCGCGGCGTGGTGCGTGGGATCGGTGCCGGGCACCTG TTCCGCCTGAGCGGCTATCCGCGCGATGACCAGAACCGCGAGTACCTGGTGGTCGGCGCCGAATACCGGGTGGTCCAGGAACTCTACGAAACCGGCAGCG GCGGCGCCGGCTCGCAGTTCGAGAGCGAGCTGGACTGCATCGACGCCAGCCAGTCGTTCCGCCTCCTGCCGCAGACCCCGGTGCCGGTGGTGCGCGGTCC GCAGACCGCGGTGGTGGTGGGGCCCAAGGGCGAGGAGATCTGGACCGACCAGTACGGCCGGGTCAAGGTGCACTTCCACTGGGATCGCCACGACCAGTCG AACGAGAACAGCTCCTGCTGGATTCGCGTGTCCCAGGCCTGGGCCGGGAAGAACTGGGGTTCGATGCAGATCCCGCGGATCGGCCAGGAAGTGATCGTCA GCTTCCTCGAAGGCGACCCGGACCGGCCGATCATCACCGGGCGGGTCTACAACGCCGAGCAGACGGTGCCCTACGAGCTGCCGGCGAACGCCACCCAGAG CGGGATGAAGAGCCGTTCGAGCAAGGGCGGCACGCCGGCCAACTTCAACGAGATCCGCATGGAGGACAAGAAGGGCGCCGAGCAGTTGTACATCCACGCC GAGCGCAACCAGGACAACCTGGTCGAGAACGATGCCTCGCTGTCGGTCGGCCACGACCGCAACAAGAGCATCGGCCACGACGAGCTGGTACGCATCGGCA ACAACCGCACCCGCGCGGTGAAGCTCAACGACACCCTGCTGGTGGGCGGGGCGAAGAGCGACAGCGTCACCGGCACCTACCTGATCGAGGCCGGTGCGCA GATCCGCCTGGTCTGCGGCAAGAGCGTGGTGGAGTTCAACGCCGACGGCACCATCAATATCTCCGGCAGCGCCTTCAACCTCTACGCCAGCGGCAACGGC AACATCGACACCGGCGGCCGCCTCGACCTCAATTCCGGCGGTGCCAGCGAGGTCGACGCCAAGGGCAAGGGCGTGCAGGGCACCATCGACGGCCAGGTAC AGGCGATGTTTCCGCCGCCGGCGAAGGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCGGCGGCATCCTGGCCGCCCGCCCTCGGGCAGGACGCCGCGGGAGCCTTGACGATTCGCGCATGTCCTCGCCAGGCAGAAGCGGCGGTCGCTCAAGAC CGATGGTGTTGCGCTCAGGGTAGGTCGACCTTCAGGCCGCGGCCAGTGCGTATGCCGACGTAGAATGCGTCCTTGAGGGCCCTGGCGAGTTCCGGGTCGG TCTCCTCGAACTCTTTCCCGGCGATGCCGCCGAAGCTCAGCCGGTGCAACGCGGAACGGTCCAGGCTGCGGTCGAGCAGCACGGCTTTCAGGTACAGCAA CTGCTTTTCCACGGAGAGCAGCATCCCGCATTGCGGATGCCGGGCCAGCCGCTCGGCGACCAGCGCCAGGGCGCGTTCGACATAGTTCACGGGGGACATG GCTGCGCCGCTTCAGCCCTTGGGAAAGCCCGTCTCGTACTCCTCGCGGGTGATTTCCCGGCCGAAACGCAGCGCATCGTTGAACAGGCGGTTGTCGTGCT
|
|
| Amino Acid Sequence |
>VgrG1a
MQLTRLVQVDCPLGPDVLLLQRMEGREELGRLFAYELHLVSENPNLPLEQLLGKPMSLSLELPGGSRRFFHGIVARCSQVAGHGQFAGYQATLRPWPWLL TRTSDCRIFQNQSVPEIIKQVFRDLGFSDFEDALTRPYREWEYCVQYRETSFDFISRLMEQEGIYYWFRHEQKRHILVLSDAYGAHRSPGGYASVPYYPP TLGHRERDHFFDWQMAREVQPGSLTLNDYDFQRPGARLEVRSNIARPHAAADYPLYDYPGEYVQSQDGEQYARNRIEAIQAQHERVRLRGVVRGIGAGHL FRLSGYPRDDQNREYLVVGAEYRVVQELYETGSGGAGSQFESELDCIDASQSFRLLPQTPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRHDQS NENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLYIHA ERNQDNLVENDASLSVGHDRNKSIGHDELVRIGNNRTRAVKLNDTLLVGGAKSDSVTGTYLIEAGAQIRLVCGKSVVEFNADGTINISGSAFNLYASGNG NIDTGGRLDLNSGGASEVDAKGKGVQGTIDGQVQAMFPPPAKG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|