Pseudomonas aeruginosa UCBPP-PA14, PA14_01070 (tssF1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GAACTGACCCTCCAGGAGCGCCTGCAGCCGTCGCTGCTCGACCGCCTCACCGACGACGAGCCGGGCAACCTCAAGGAAGCCGCGGAGCGCCGGGTGCTGA CCCTGAGCCAGCTGAAGGCCTCGGTGCTGCGCGACCTGGCGTGGCTGTTCAACACCACTTCGCTGTTCGACCACGGCCCCGCCGCACGGATGCCGGCCGG CAACTCGGTGCTCAACTACGGGCTGCCGGCGCTGGCCGGGCACACCGCGTCGAGCGTCGACGTGCATGCCATCGAGGCGCTGCTCACCGAGACCATCGCC ACCTTCGAGCCGCGCATCATCCGTTCTTCGTTGCGGGTGCGCGCGCAACTGCTGCCCGGCGAGATGGACCACAACGCCCTGAGCTTCGAGATCGAGGGCG ATCTCTGGGCCGAACCGGCGCCGCTGCGCCTGCTGCTGACCACCAACCTGGACCTGGAGACCGGTCACGTGCGCGTCGCCCAGGGCGAGCGGAGGCGTAC
DNA Sequence for Gene
>PA14_01070 |tssF1
ATGAACCCGCGCCTGCTCGAGTACTACAACCAGGAATTGCAACACATCCGCGAAAGCGCCGCGGAGTTCGCCGAGGAGTTCCCGAAGATCGCCGGGCGCC TGTCGCTGTCCGGCTTCGAGTGCGCCGACCCCTACGTCGAGCGCCTGCTGGAAGGCTTCGCCTATCTCACCGCGCGGGTCCAGCTGAAGCTCGACGCGGA GTACCCGACCTTCACCCACAACCTGCTGGAAATCGCCTACCCGCACTACCTGGCGCCGACTCCGTCGATGACCGTGGTGCAGCTGCGCCCGGACCCCAAC GAAGGCGCCCTGAGCAGCGGCTTCAGCGTCGAGCGCGGGGCCTCCCTGCGCGGCCAGCTCGGCCCCGATGACCAGACCGCCTGCGAATACCGCACCGCCC ACCCGGTGACCCTGTGGCCGCTGGAAGTGGCCCAGGCCGACTACTTCGGCAATCCCGCCGCGGTGCTCGGCCGCCTCGCCGCCAGCGAGCCGCGGGCCAA GGCCGGCCTGCGCATCCGCCTGCGCAGCGGCGCCGGTATCCCGTTCGACAGCCTGTCGCTGGACGCCCTGCCGCTCTACCTGCACGGCGCCGACGAACAA CCCTACCGCCTCTACGAACAATTGCTCGGCAACGCCTGCGCGGTGTTCGTCCGCGCCCCGGACAATGCCTGGGTCGAACGCCTGCCGACGAGCAGCCTGC GTGCGCGTGGCTTCGACGACGAGGACGCGCTGCTGCCGGTGGTGCCGCGGGCGTTCCAGGGCTACCGCCTGCTGCAGGAATACTTCGCCCTGCCGGCGCG CTTCCTGTTCGTCGAGTTCTCCGGCCTGAACCGCGCCCTGCGTCGATGCCACGGCGAGGAGCTGGAACTGGTCGTGCTGTTCGGCAAGCACGACCAGCGC CTGGAGGGCACGGTGGACGCGGAGCAACTGGTGCCGTTCTGCACCCCGGCGATCAACCTGTTCCCGCGCCGCTGCGACCGCATCCACCTGTCCGACCGGG TCAACGAGCATCATGTGATCGTCGACCGCACCCGTCCGCTGGATTTCGAGGTGCATTCGCTGCAACAGGTGAGCGGCCACGGCAGCGGTCCGGAGCAACC CTTCCAACCGTTCTACGCGGTGCGCGACCCGGCGCGCTACGGCCGCGAGCAGGCCTACTTCAGCGTGCGCCGCGAACCGCGCGTGCTGTCCAGCAAGCAG CGGCGCAAGGGCCCGCGCTCGACCTACGTCGGCAGCGAGACCTTCGTCGCCCTGGTCGACGCCAACCAGGCGCCCTATCGCCACGACCTGCGCCAGCTCG GCATCGCCGCGCTGTGCACCAACCGCGACCTGCCGCTGTTCATGCCGATCGGCGCGCACAAGAGCGACTTCACCCTGGAGGACAGCGCCCCGGTCATGCA GGTGCGCTGCCTCGCCGGACCGAGCCGGCCGCGCGCCAGCCGTGCCCACGATGCCAGCGCCTGGCGGCTGATCAGCCAGCTGTCGCTGAACTACCTGTCG TTGGCCGAGCGCGGCCAGGGCGCCGCCGCCCTGCGCGAGCTGCTGCGGCTCTACGGCGACAGCGGCGATCCGGCGCTGCAACTGCAGATCGAGGGCCTGC GCGAGGTCAGCAGCAAGCCTTGCACGCGGCGCCTGCCGATGCCCGGGCCGATCGTCTTCGGCCGTGGCCTGGAGATCACCCTGGACTTCGACGAGAACGC GTTCCGTGGCACCGGGGTGTTCCTCCTCGGCGCCGTGTTCGAGCGCTTCCTGGCACGCTACGTGTCGATCAACAGCTTTACCGAGACGGTGCTGCGCACC GGCGAACGGGGCGAGGTGATGAGATGGCAGGCGAAGCCGGGCAGCCGTCCGAACCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCTGCTCGCCGGGATGGCGGCGGCGCCCTGGGATTACGACTTCTTCCAGGCGCTGCGGCGCATCGAGTGCGAGTCGCCGCAACTGCCGCGCCTTGGTCA TTCGGTGCGGCTGGCGGACGACCCGCTGCGTCTCGGGCAGAAGCCCGACTGCACCTTCGCGCCCTCGACCCTGGCCTCGGTGAGCCAGGCCGGCACCGCT GCGGTGCCGCGCCTGGACCAGTTCTTCTTCGGCCTCACCGGCCCCAACGGGCCGCTGCCGCTGCACCTCACCGAATACGCCCGAGAACGCCAGCGCAACG TCAACGACGCGACCTTCAAGCGCTTCATGGACGTCTTCCACCACCGCCTGCTGACCCTGTTCTACCGGGCCTGGGCCGAGGCGCGGCCGGAGATCAGCCA CGACCGGATCGACGACGACTACTGGTCGGCGCGTCTCGCCGCGCTCTCCGGGCGCGGCATGCCGAGCCTGCGGGGGCGCGAGCCGCTGGCGGACACCGCA
Amino Acid Sequence
>TssF1
MNPRLLEYYNQELQHIRESAAEFAEEFPKIAGRLSLSGFECADPYVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLRPDPN EGALSSGFSVERGASLRGQLGPDDQTACEYRTAHPVTLWPLEVAQADYFGNPAAVLGRLAASEPRAKAGLRIRLRSGAGIPFDSLSLDALPLYLHGADEQ PYRLYEQLLGNACAVFVRAPDNAWVERLPTSSLRARGFDDEDALLPVVPRAFQGYRLLQEYFALPARFLFVEFSGLNRALRRCHGEELELVVLFGKHDQR LEGTVDAEQLVPFCTPAINLFPRRCDRIHLSDRVNEHHVIVDRTRPLDFEVHSLQQVSGHGSGPEQPFQPFYAVRDPARYGREQAYFSVRREPRVLSSKQ RRKGPRSTYVGSETFVALVDANQAPYRHDLRQLGIAALCTNRDLPLFMPIGAHKSDFTLEDSAPVMQVRCLAGPSRPRASRAHDASAWRLISQLSLNYLS LAERGQGAAALRELLRLYGDSGDPALQLQIEGLREVSSKPCTRRLPMPGPIVFGRGLEITLDFDENAFRGTGVFLLGAVFERFLARYVSINSFTETVLRT GERGEVMRWQAKPGSRPNL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site