Pseudomonas syringae pv. syringae B728a, Psyr_4349 (lnt)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCGACAGTGATGACGTCAAGAAGCTGCTGCGTCCGGCCACCTTCGTGCCCGAATCCAAGCGTCTCAACGTGCTGCTGCGCGAGTTTCGCGCCAACCAC AACCACATGGCCATCGTCATTGACGAATACGGCGGCGTGGCAGGTCTGGTGACCATCGAAGACGTGCTGGAACAGATCGTCGGCGATATCGAAGACGAGC ATGACGTCGAGGAAGACAGCTACATCAAACCGCTGCCCAGCGGCGACTTCCTGGTCAAGGCCCTTACCCCGGTCGAGAATTTCAACGAATTCTTCGACAG CACGTTCTCGGACGACGAGTTCGATACTGTGGGCGGTCTGGTGATGAATGCCTTCGGCCATCTGCCCAAGCGCAACGAAATCACTGAAATCGGTGCTTAT CGTTTCCGCATCCTGAGCGCTGACAGCCGTCGCATTCATTTGCTGCGCGTGACGCCCATTTCACGTCCGTAAACACTTGATGCTGCTTTAAGGAATCTAC
|
|
| DNA Sequence for Gene |
>Psyr_4349
|lnt
ATGCGCTGGATAACCCGCCCCGGCTGGCCCGGTAACCTGCTGGCCCTGGCGGCTGGCGGGCTCACGACTCTGGCCTTGGCGCCTTTCGACCTCTGGCCTC TGGTGCTGGTGGCAGTGGCGATGTTCTATCTGGGCCTGCGCGACCTGAACCCGCGCCAGGCACTGGCCCGCGGCTGGTGCTACGGCTTCGGTCTGTACGG CGCTGGCACCAGCTGGATCTACGTCAGCATTCACACCTACGGCGGCGCGTCTGTACTGCTGGCCGGGCTGCTGATGCTGCTGTTCATCGCCGCCATTGCC CTGTTCTTTGCCCTGCCCGCCTGGGTCTGGGCGCGCTGGCTGCGTCGCAATGAGGCACCGCTGGCTGATGCGCTGGCCTTCGCAGCCCTGTGGCTGTGGC AGGAAGCGTTTCGCGGCTGGTTTCTTACCGGTTTCCCGTGGCTCTATTCCGGCTACAGTCAGCTCGACGGTCCACTGGCCGGGCTCGCCCCCGTCGGCGG CGTATGGCTGATTTCGTTCTCGCTGGCGATGACTGCTGCACTGTTGTGCAACCTGCACCGCCTGCGTGCACGCAAATCGTTTCTGGCCATGGGCGTGGTG CTGTTGCTGGCCCCGTGGGCGACAGGCCTGGCCCTCAAGGGGCACGCCTGGACATCGCCGTCCGGCGCGCCACTGAAAGTCGCGGCGATGCAGGGCAACG TCGAACAAAGCATGAAGTGGGACCCGCAAAAGCTCAACGATCAGCTGGCCCTGTACCGCGACATGACTTTCCGTTCGCAGCAGGCAGACCTGATCGTCTG GCCGGAAACCGCCGTGCCGGTGCTCAAGGAAAGCGCAGAAGGCTATCTGTCGATGATGGGCAAGTTCGCTTCGGACCGCGGCGCGGCACTGATCACCGGC GTACCGGTGCGCGAACCGACCGGGCGCGGTGAGTACCGCTATTACAACGGCATCACGGTCACAGGTCAGGGTGACGGCACCTACTACAAGCAGAAACTTG TGCCGTTCGGTGAGTACGTGCCGCTGCAGGACCTGCTGCGCGGGCTGATTTCCTTCTTCGATCTGCCAATGTCGGACTTCGCGCGCGGCCCGAACGATCA GGCGTTATTGCAGGCCAAGGGTTATCACATCGCGCCGTTCATCTGCTACGAAGTGGTCTATCCCGAGTTTGCCGCTGGCCTGTCGGCGCAAAGCGACCTG CTGCTGACGGTCAGCAACGACACCTGGTTCGGCACCTCGATAGGCCCTCTGCAACACTTGCAAATGGCCCAGATGCGCGCCCTTGAAGCGGGTCGCTGGA TGATCCGCGCCACCAACAACGGCGTGACCGCGCTGATCGACCCGTTCGGCCAAATCACCGAGCAGATTCCGCAGTTCGAACGCGGCGTGCTGTACGGCGA AGTAGTGCCGATGCATGAACTCACGCCGTATCTGCACTGGCGCTCGTGGCCGCTGGCAATTGTCTGCCTGCTGCTGTTCGGCTGGGCATTGATGGCGGCA CGGATTTCCAAGACCGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTGCACGAAGCCGGTTTCATCTGCCTGCAGGCGGAATCGGCTTCAAATGATCACTGCTCCAGATGATCATTGCCCCTTCCGATAGACCCACGGATACACC AGCAAGCCTGCGGCTTCATTGAGCAGCATCCCGCTCTGCGTGAACACGCGACTTTCAGGCAGCCAGCCACCAAAAGGCCGAGCGTTGTCGACCCCCAGAA AGCCGACCGGCGCACCCACCACCGTGAAACCCGCCTGCTCGAAGCTCCAGCGTGCCCGCGGCATGTGCCAGGCCTGAGTCACCAGCACCACGCGCTTGAT ACCTTGCGGCTGCAGAATCGCGGCGCTCATGGTTGCGTTTTCCCATGTGGTGCGGCTCAGCCCCTCCTGCCAGCGCACCGTCACGGCAAAATCGTCCTGC AGCGACTGCGCCATGATCGCCGCCTCGCTGGGCGGCTGGTCAAAATGCAGGCCGCCAGAGGTCAGTATTGGCAGTCCGGATTCTTTCGCCAATCGCGCCG
|
|
| Amino Acid Sequence |
>apolipoprotein N-acyltransferase
MRWITRPGWPGNLLALAAGGLTTLALAPFDLWPLVLVAVAMFYLGLRDLNPRQALARGWCYGFGLYGAGTSWIYVSIHTYGGASVLLAGLLMLLFIAAIA LFFALPAWVWARWLRRNEAPLADALAFAALWLWQEAFRGWFLTGFPWLYSGYSQLDGPLAGLAPVGGVWLISFSLAMTAALLCNLHRLRARKSFLAMGVV LLLAPWATGLALKGHAWTSPSGAPLKVAAMQGNVEQSMKWDPQKLNDQLALYRDMTFRSQQADLIVWPETAVPVLKESAEGYLSMMGKFASDRGAALITG VPVREPTGRGEYRYYNGITVTGQGDGTYYKQKLVPFGEYVPLQDLLRGLISFFDLPMSDFARGPNDQALLQAKGYHIAPFICYEVVYPEFAAGLSAQSDL LLTVSNDTWFGTSIGPLQHLQMAQMRALEAGRWMIRATNNGVTALIDPFGQITEQIPQFERGVLYGEVVPMHELTPYLHWRSWPLAIVCLLLFGWALMAA RISKTV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|