Pseudomonas syringae pv. syringae B728a, Psyr_4191 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4191
Name
carB
Replicon chromosome
Genomic location 4983696 - 4986917 (- strand)

Cross-References

RefSeq YP_237259.1
GI 66047418
EC Number 6.3.5.5
Entrez 3369730
INSDC AAY39221.1
NCBI Locus Tag Psyr_4191
UniParc UPI0000395525
UniProtKB Acc Q4ZNQ1
UniProtKB ID Q4ZNQ1_PSEU2
UniRef100 UniRef100_Q4ZNQ1
UniRef50 UniRef50_P00968
UniRef90 UniRef90_Q88DU6

Product

Feature Type CDS
Coding Frame 1
Product Name
carbamoyl phosphate synthase large subunit
Synonyms
Evidence for Translation
Charge (pH 7) -27.17
Kyte-Doolittle Hydrophobicity Value -0.089
Molecular Weight (kDa) 117.6
Isoelectric Point (pI) 4.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004401 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4191
Search term: carB

Human Homologs

Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.2e-228
Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.2e-228
Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.2e-228
Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.2e-228
Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.2e-228
Percent Identity: 40.9

References

No references are associated with this feature.