Pseudomonas syringae pv. syringae B728a, Psyr_3911
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTACGTGAACTACTTTCGTTCGATCCCGCTGCTGCTGGTGATCACCTGGTTCTATCTGGCCGTGCCGTTCGTGCTGCGCTGGATTACCGGTGAAGACA CGCCCATCGGTGCGTTTGCCTCCTGCGTCGTGGCCTTCATGATGTTCGAAGCCGCGTACTTCTGCGAAATCGTCCGTGCCGGTGTGCAGTCGATCTCCAA GGGACAAATGGGCGCCGCTCAGGCGCTGGGCATGAACTACTCGCAGATGATGCGACTGATCATCCTGCCCCAGGCGTTTCGCAAGATGACCCCGCTGCTG CTGCAACAGAGCATCATTCTGTTTCAGGACACCTCTCTGGTGTACACCGTCGGCCTCGTCGATTTTCTCAACGCATCGCGCTCCAGTGGCGACATCATCG GGCGCGCCAACGAGTTCCTGATCATTGCCGGTCTGGTGTATTTCACGATCAGCTTTGCCGCCTCGCTGCTGGTGAAGCGTCTGCAAAAAAGGTTTGCCGT
|
|
| DNA Sequence for Gene |
>Psyr_3911
ATGATTTCCATCAAAAACGTCAACAAGTGGTATGGGGACTTCCAGGTACTGACCGATTGCAGCACCGAGGTCAGCAAGGGCGAAGTGGTGGTGGTGTGCG GCCCGTCCGGCTCGGGCAAATCGACCCTGATCAAATGCGTGAACGCGCTGGAGCCGTTTCAGAAAGGCGAGATCGTCGTCGACGGCACATCGATCTCCGA CTCGAAGACCAACCTGCCGAAACTCCGCTCGCGGGTGGGCATGGTGTTTCAGCACTTCGAACTGTTTCCGCACCTGAGCATTGTCGAAAACCTGACCATC GCGCAGATCAAGGTGCTGGGCCGCAGCAAGGCCGAAGCCACCGAGAAGGGTCTGAAGCTGCTTGAGCGCGTCGGTCTTTCCGAGCATGCGCACAAGCATC CCGGCCAGCTTTCCGGTGGGCAGCAACAGCGTGTCGCCATCGCGCGCGCGCTGGCGATGGACCCGGTGGTCATGCTGTTCGACGAGCCCACGTCCGCGCT CGACCCGGAAATGGTCAATGAAGTGCTCGATGTGATGGTGCAACTGGCCCAGGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGTTTCGCGCGC AAAGTCGCCAACCGGGTGATTTTCATGGACAAGGGGCAGATCGTCGAAGACTGCGCCAAGGAAGAGTTTTTCGGTGACGTGAGCGCACGCTCGGAACGCG CTCAGCAATTCCTCGCCAAGATTCTTCAGCACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAATAGCTTGACGGCTGTCCGCCTATCAGCGGGCAGCTGTTCGGTCCAGGACGACTGTGATGAAATGCGACCCCACTCTTTATCGCGCCGCCCCGCCAT CACTCGCCGTGAAACCCCGTCTGATCCGTCAACTGTTTCTGCCGCCGCTGATCCTCATGCTGATGATCGGGCTGGGCTATATCGCCTATCTGGTCAGTGA ACACAGCGGCATCAAGAGCCTGCGCGAAACCGGCGAACGTCAGCTCGAGCTGCACGCGCGCACGGTCGAGAGCGAAATCAGCAAATACACCTACCTGCCC AGCGTGCTGGAGCTCGAATCCAGCGTGTCGCAGTTGCTGAACGAACCGGGACCCGAGCTTCAGCAGCAGGTCAACCGCTACCTCGAAGGGCTGAATCGAC GCAGTCGCAGCCGTGCCATTTATGTAATGGATACCACCGGACGCGTGCTGGCCACCAGCAACTGGCGCGACGCCGACAGTTATCAGGGTGAAGACCTGTC
|
|
| Amino Acid Sequence |
>ABC transporter
MISIKNVNKWYGDFQVLTDCSTEVSKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGEIVVDGTSISDSKTNLPKLRSRVGMVFQHFELFPHLSIVENLTI AQIKVLGRSKAEATEKGLKLLERVGLSEHAHKHPGQLSGGQQQRVAIARALAMDPVVMLFDEPTSALDPEMVNEVLDVMVQLAQEGMTMMCVTHEMGFAR KVANRVIFMDKGQIVEDCAKEEFFGDVSARSERAQQFLAKILQH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|