Pseudomonas syringae pv. syringae B728a, Psyr_3721
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGAAAACACAGTCTACGTGCGACAAAGTACCCTGTTGCCCAAAATCAGTAGGCACTATATCCTGCGTTTCGAAATGTAAAAAACACTAGATAAGGGATTC GCCTGAATTTTTCCCTGTGTTTTAGCCTGATCCGATCCGATGTTGAAACGGGTAAGAAAAAGCGTGAAGCTCTCGCCGAAAATTACTCATGGATAACCAA GTGCCGGGCAAAATCTGTATAATCCCGCGCTCGCTTCAGGGTACTCAAATGACCATTTGCACACGCAAAGCTGGCTCACCTCAAAGCAATCCAGATCATT CGCTTTGCTCGCCTGTCGGGCGTTGCCACGGCAGCAAATCGAGCGAACGACCGACCACCCAATAGCCGGTCAATCGCAGCATCAGTAATCAGGTAATTCC CATACTCCAGTGCCTTCGTCTTCCACGTGACGTCGGCGCACCACATCTTGAAATCTAATCACGGGCGCCAAGGCGACCCCTAAGCAGGAGCCTCATCACC
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| DNA Sequence for Gene |
>Psyr_3721
ATGCTGAGCTGGGACGAATTCGATAAGGAAGACGGCGAAGTAGTCGCCAAAGCGACCAACGCCGGTCATGCCAACGAAGCCAACATGGACCGCCTCGACA GCGCCGGTGGCCTGGCTGCACAGGAAGCCCGCGCCGTGACCGCCGCCGACTCCGCTGCCCTGATCCGCGCCAAGAAAGCGCTGGACGCACTGGACGTCGC TGAAGGCCTGGCCGAGCTCGAAGGCGCCAGCGCCCGCGTCGCCGTTGACGAAAAAATGATGATCAACTGCCGCGCCGACCTCAACCAGCTCGTGCCTTTC AAGTACGACTGGGCCTGGCAGAAGTACCTGGACGGTTGCGCAAACCACTGGATGCCGCAAGAAGTCAACATGACCGCCGACATCGCCCTCTGGAAAAACC CGGAAGGCCTGACCGACGACGAGCGCCGCATCGTCATGCGTAACCTGGGCTTCTTCTCCACTGCCGACTCGCTGGTTGCCAACAACCTGGTATTGGCCGT GTATCGCCTGATCACCAACCCGGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAATCG CTGGCCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCGTCGGTCGCTAAAAAAGCAGCCTGGGGCCTGAAGTACACCCGTTCGATCTCCG ATCCGAAGTTCGAAACCGGCACCGTCGACACCGACAAAGAGCTGCTGCGCAACCTGATCGCCTACTACTGCGTTCTGGAAGGCATTTTCTTCTATTGCGG CTTCACCCAGATTCTCTCGATGGGCCGCCGCAACAAGATGACCGGCGTTGCCGAGCAGTTCCAGTACATCCTGCGCGACGAGTCCATGCACCTGAACTTC GGCATCGACGTGATCAACCAGATCAAAATCGAAAACCCGCACCTGTGGGATGCCGAGATGAAAGAAGAAGCCACGCAGATGATCCTGCAAGGCACCCAGC TGGAAATCGAATACGCCCGCGACACCATGCCCCGCGGCGTACTCGGCATGAACGCTGCGATGATGGAAGACTACCTGAAATTCATCGCTAACCGCCGCTT GAGCCAGATTGGCTTGAAGGAAGAGTATCCAGGGACGACCAACCCGTTCCCCTGGATGAGCGAGATCATGGACTTGAAGAAAGAGAAGAACTTCTTTGAG ACTCGGGTTATTGAGTATCAGACGGGCGGGGCGTTGAGCTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTGCATCCCGCGGAGTTGCAATAAAAGCTGAACCCATCTCATCAAAAATGAAACGGGTTCTGAGAAAAGGGCTGCCAACTGGCAGCCTTTTTTATTTTT GTTTCGGCAGAAACGTGAGGTTTGACTCGGTTAATTCCGGTCGAACGCGAATCCGGCCGGGCCTCGCCTGTTTTTGCCTTGCCTGACCTTCCTCTCGGCC ATCATCCCAGACGGCAAAGACCAGGACGACGGGTGATGGCAAAGGGAAGGTCAAACGAAACTAAACGGTTTCCAAAGACAATCTGGTTTGGCTGGCCCTC CCCTTATTGGTAACTGCCTCAAGGATCGCCCGCCCCAGCTCGCGAATGTCGGGCTCTTTCACCATGGAGTGATGAGTTCCCATGATAGAGATGACTTGCA ACTGCTCCTTGGGCATCAGCGCCTCCCAACCAATGCTGATATCACTACGGTTTTCTCCCATTGCTGAGAATAAAGTGACACGCACCGGTAGCGCGGGCGG
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDGEVVAKATNAGHANEANMDRLDSAGGLAAQEARAVTAADSAALIRAKKALDALDVAEGLAELEGASARVAVDEKMMINCRADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNF GIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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