Strain | Pseudomonas simiae strain WCS417. [Details] | |
DNA Sequence Upstream of Gene |
CGTAATGACCTGCTGCGCATCAATGCCGCCGTGCGCGAAGAAACCGCCCACCGTGGCGTAACCATGATGGGCAGCACCGTGGTGCTGTTGGCCGCGCGTG GCTTGCGCGGCGTGTGCTTGTGGGCTGGCGACAGTCGCTTGTACCGCCTGCGCGATGGCGTGCTCGAAGGGATCTCCCGCGACCACAGTTACGTGCAAGA CCTGCAAGACAGCGGTCTGCTCAGCGAAGCTGATGCGCGCACGCATCCACGCGCCAACATCGTCACCCGAGCGATTGGCGTGGAGGCGTACCTGGAATTG GCGGTGGTCGACCTGCTGATCGCCCCCGGTGACAGCTACCTGTTGTGCAGCGACGGCCTGAACAAGACCGTTGAAGACCATGAAATCCGCGAAGTCCTGG GCCACGACACGCCGGATGAAATCGTGCGCAGCCTGGTGCATCTGGGGCTCAGCCGGGGTGCGCCGGACAACATCACTGCCATCGTCGTGAAGGTATCACC
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DNA Sequence for Gene |
>PS417_RS00640
ATGAACATCGTCATCCCGGGTTATGACATCGAAGGCGAAATTGGCGAAGGCGCCATGGCCAGCGTGTACCTGGCGACCCAGCGTTCCCTGGAGCGCAAAG TGGCCTTGAAGGTGATGGCGGCGGCATTGGCGGCCGACCCGAGCTTCTGCGAGCGCTTCCTGCGCGAGGGCAAGACCCTGGCGCGCTTGTCGCATCCGCA CACGGTGACCATCCATGACATCGGCAATGTCGGTGAGCTGTACTACATGGCCATGGAATACCTGCCCAACGGCACGCTCAAAGAGCGCATCGCCGCCGGC ATGACGCCGGAGCAGGGGGTGACGCTGATCCGCCAGATCGCCTCGGCACTGGGCTATGCCCATGCTCAGGGCCTGGTACACCGCGATGTGAAACCGGCGA ACATTCTGTTCCGCGCGGATGGCACGGCAGTGTTGTCCGACTTTGGTATCGCCAAGTCGCTGGATGATCGCACCCAGTTCACCCAGGCCGGGTTTGCCGT GGGCACGCCGAGCTATATGAGCCCGGAGCAGGCGCGGGGCCAAGAGATTGATGGTCGGGCGGACTTGTACGCGCTGGGCGTGGTGCTTTACGAGATTCTC GTCGGCAAGCTGCCGTACACCGGCACGGATGCACTGTCGACGGCGCTGGCGCACCTGACCGAACCGCTGCCCGAATTACCGGTGCACCACGGCCGTTATC AGGACGTGCTGCGCAAGCTGTTGGCCAAGGATCCCGCGGAGCGTTTTCCGGATGCGGCGGCGTTGTTACAGGCGTTGGATAACCTGCCGTCGGAGTCGCC GGAAGCCACGTTAGTGCGGCCGCTGCCGATCCCGATGAGTTTTGATTTAGCCGGCATCACCCCGGAATCCATCGAAATCCCTACCGAAAAACCCCAGCCG GTGCGCCAACCGGTGGTGCCGCCGATCCAGCACAGCGAGCAGCGCCGTGGTCCGGTGTTGGCACTGGCCGCTGTTGCGGTGGCGGTTGCGTTGGCCATTG GTGGCGCGAGCTATTGGTGGTTGAGTGGCGGCGATGAGCCTGTGGCCAAACCGCCCGCTGCGGCAGTGCCTGCGGTGGCTTCGCCTGTGGCCGAAGCGGA TGGCGGTCAACGTCCGTTGCTCATGGCAGGCAAGAAGACGCTGTTCCAGCGCGTGCTCAGCAAGCCGGGCGCCAAGCTGTCCGCTGACGCCGGCAGCGCG CCGGGCAAAGCCCTGCCGGCGTTCTCCGTGCTCTACGTCTACCAACGCAAGGACGTTGACGGCAGCCCGTGGGTACGTGTCGGCGCCGCCACCGATGGTC GCAGTGACGGTTGGTTGCCTGCGTCCCAGGTCAGCGACTGGAAGCAGAGCCTGGTGCTCAAATTCACCGAGCGTTCGGGGCGGGCGCCGGTGATGTTCCT GCGCCAATCCGCTGAAGTGGAAAAGCTGCTGGCTGACCCGGCCGCCGCCAAAGGCGTACTGGCCAAGGCGCAGAAAAACAGCGAAGACAACAGCCAGATC CTGGCGCTGGAGCCGGCCGCCAGCGCCGTGCCGCAAAACCAGTTCTACCTGCTGCCGATCTTCGACGCCAAAGAGAGCTTCGACGAAAACGGCCAGCCGG TGCAGTTGCTCAATGTGGCCTCCATCGACCCAGGCACCAGCGCCGCCAAACCGGCTACACCGGTGATCAGCGCCAATGCCGACGCCTTTCGCACGGCGGT GGTTCTCGTGGTCGATACCACCGTTTCCATGCAGCCCTACATCGACCAGGTCCGCGACGTCGTGCATGAGCTGCAAACCCGTATCGGCGAGCGGGGCGAG TTGGACAGCGTGAGCTTCGGCATGGTGGGCTTTCGCAGCAGCATCAAGAAAACCCCAGGCCTGGAATACGTCGCCAAGACCCTGATCACCCTCGACCAGG GCCGTGACCCGCAGCGTTTCCTCGACATGGCGCGCCAGGTCAAGGCGTCCACTGTGTCCAGCCACTCGTTCAACGAAGACGCGTTTGCCGGGGTGATGCA GGCGGTGGATGGCATGGATTGGTCCGGCTATGGCGGACGCATCATTCTGCTGGTCACCGATGCGGGTGCGCTGCGCAAGAACGATCCCTTTGCCGCCACC CAGATGAACGAAGCCGAAGTGCGCCAGGCCGCGTTGGGCAAGCAGATCAAGATCTACGCCCTGCACTTGCGCACCGACGCCGGCAAGAAAACCCATGCCG GCGCCGAGAGCCAGTACCGCATCCTCACCGCCGACGCCAACCCGCAGATCGGCGACCTCTACACCGCGGTGCCCGGTGGCGACGTGCGCAAACTCGGTGA GCGTGTGGATGAGATCGGTACGGTGTTCGCCAACCTGGTGCACCAGGTGCGCAGCAACACGCCGCAGCCGGTGCCGTTGCTGAACAGCGCACCGAGCCTG GCGGACAAATCCGCCGCCGTCGGTTATGCCATGCACATGGATTTCCTCGGTCGCAAAACCGCAAGCCAGGCGCCGCAACTGGTCAGCGCCTGGACCGCCG ACCGCGACCTGACCAACCCGGCACTGCCGGCGTTCCAGGTGTGCGTGATGCTGACCAAGCTGCAGCTCAACGATCTGCAGCAGTCGCTGAAGTTGATCGT CGACGCGGCGCGCAAGACGCAGACCTCGCCCAAGGACTTCTTTCAGGAAATCGCCAGCGCTTCGGCCTATATGAGTCGCGACCCGCAGGCCCTGCGCAAG GGCGGCAACCTGGCCGACGGCGGCATTCTCGGCGAATACCTGGAAGGCCTGCCGTACCGCAGCAAGTCGCTGAACATGACCCAGGACCTGTGGTTGTCGT TGAGCGTGGCCGAGCAGGAAGACTTCATCGATGAGCTGGACTCGAAGATCCGCCTCTACGAAACCTTCCACAATGACCTGGCCAACTGGGTCCGTTTCGG CGATGCCGAGCCGGGCGATGCGTTGTACCGCGTGCCGTTGTCGACGTTGCCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCTGAACCTGAGCGCGGTGCACAAGAGCCGAGGCGTCGGTAGCCAGCGCTATAGCCTGGTGATCCCGGCGCTGGCGCTGCGTGCGGGTGAGCAACTGGC GATTGTCGGGCCCAGTGGTTGCGGCAAGAGCACCTTGCTGGATTTACTGGCGCTGGTATTGGCGCCGGATCAGGTCGGGCAGTTCGAATTCCATCAGCAG GACATAGCCGGGCTGTGGCACGGCGATCAGCAATCCACCCTGGCCGCGCTGCGTAGCCAGCATCTGGGGTATGTGCTGCAAACCGGCGGTCTGCTGGGGT TTCTCGATGTGCGCGGCAATATCGCGTTGTCCCGGCAACTGTTGGGTTTGAAGGACGATGGCAGCGTGGCGCGCCTGGCCGAGCAGTTGGAGATCAGCGA CCAGTTGACCAAGAAGCCGACGGCGCTTTCGGTGGGCCAACGCCAACGCGTCAGCTGTGCCCGCGCCCTGGCCCATGCGCCACAACTGGTGCTGGCGGAT
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Amino Acid Sequence |
>serine/threonine protein kinase
MNIVIPGYDIEGEIGEGAMASVYLATQRSLERKVALKVMAAALAADPSFCERFLREGKTLARLSHPHTVTIHDIGNVGELYYMAMEYLPNGTLKERIAAG MTPEQGVTLIRQIASALGYAHAQGLVHRDVKPANILFRADGTAVLSDFGIAKSLDDRTQFTQAGFAVGTPSYMSPEQARGQEIDGRADLYALGVVLYEIL VGKLPYTGTDALSTALAHLTEPLPELPVHHGRYQDVLRKLLAKDPAERFPDAAALLQALDNLPSESPEATLVRPLPIPMSFDLAGITPESIEIPTEKPQP VRQPVVPPIQHSEQRRGPVLALAAVAVAVALAIGGASYWWLSGGDEPVAKPPAAAVPAVASPVAEADGGQRPLLMAGKKTLFQRVLSKPGAKLSADAGSA PGKALPAFSVLYVYQRKDVDGSPWVRVGAATDGRSDGWLPASQVSDWKQSLVLKFTERSGRAPVMFLRQSAEVEKLLADPAAAKGVLAKAQKNSEDNSQI LALEPAASAVPQNQFYLLPIFDAKESFDENGQPVQLLNVASIDPGTSAAKPATPVISANADAFRTAVVLVVDTTVSMQPYIDQVRDVVHELQTRIGERGE LDSVSFGMVGFRSSIKKTPGLEYVAKTLITLDQGRDPQRFLDMARQVKASTVSSHSFNEDAFAGVMQAVDGMDWSGYGGRIILLVTDAGALRKNDPFAAT QMNEAEVRQAALGKQIKIYALHLRTDAGKKTHAGAESQYRILTADANPQIGDLYTAVPGGDVRKLGERVDEIGTVFANLVHQVRSNTPQPVPLLNSAPSL ADKSAAVGYAMHMDFLGRKTASQAPQLVSAWTADRDLTNPALPAFQVCVMLTKLQLNDLQQSLKLIVDAARKTQTSPKDFFQEIASASAYMSRDPQALRK GGNLADGGILGEYLEGLPYRSKSLNMTQDLWLSLSVAEQEDFIDELDSKIRLYETFHNDLANWVRFGDAEPGDALYRVPLSTLP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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