Pseudomonas simiae WCS417, PS417_RS03825
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain WCS417. [Details] | |
| DNA Sequence Upstream of Gene |
AATCGCCGAGTACAGCATTCGCCTGGGCCAGTACCCACTCGCGGTCGAGTACGCGGAAATCACTGACGTTGACGGTGTTTTGCACGGTCAAGGCGGTAAC GGTCGGAGCCGCATGGCAACCCTGGGCGAGCAGGGCTTCGATATCTGCCTGCAAGCCGGCGCCACCACTGGGGTCATGGCCGGAGAGACAGAGGACAACG GGACGAGAGCTGTAGATATTCATGGTGCGCGAGCTTACCACCAAACGCTTTTGGCGGGGCCGTCTGGCGATGGCTGAATTTTGTCACTGCAGTGACGCTT TTTTGGCGGTTTTTTAGACGACAAAAATCGCTGAAAGCATCGATCTAGAGCCTTTCAAAAAATTATTTCAATGGTGTCTAGTGGCCTTTGGCAGCTATGC TAGAGTGGATCCAAACTACTGACTGTATTGCCGGTGTACGTCTTCTCAAAAGGAATGGGGGGCTTTTTTGACATGACCGGACAGGCCACGCTGGGGCTCT
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| DNA Sequence for Gene |
>PS417_RS03825
ATGCGCTATTTGCTGATTTTTTTGTTGAGCGGGCTGCCGCTGTTCGCCAACGCCATCGAGTTCAACCAGGACACGCGAAGCCTGCCGTTGGGTCGAGCCA TTCAAGTGCTCGAAGACCCGACCGATGCCCTCACCATCGCGGACGTCAGTGCGCCTTCCGCCACCCCGCAGTTCAAACCCCACGATAAAGACACCCTGAA TGCCGGCTACTCGCGCTCGGTGTTCTGGCTCAAGGTCAATTTGCACTACCTGCCGACTCAGGCCGAAGCGCAGCGCACCTGGTTGCTGGAGCTGGCCTAC CCGCCGCTCGACCATCTTGACCTGTACTTGCCGGACAGCAGCGGCACCTATCGCCTGGCGGGGCGCACGGGCGATGCGCTGCCGTTTTCCGCGCGTGAGA TCCGCCAGAACAACTACCTGTTCAAGGTCGACTTCGCGCCGGGCGAGGCCAAGACCGTCTACCTGCGCCTGCAAAGCGAAGGCTCGATCCAGGCGCCGTT GACGCTCTGGTCCAGCACCGCCTACCTGGAGCAACAGCCGCTGCGCCTGTATGTGCTGGGCCTGATCTATGGCGTGCTGCTGGGGATGCTGGTCTACAAC TTGTTCATCTACCTCAGCGTGCGCGACACCAGCTACCTCTATTACATCTTCTATATCGCCTCGTTTGGCATGTATCAGCTGTCGGTCAACGGCGCGGCGG TGGAGTATTTCTGGCCGAACAACCCCTGGTGGGCGAATGCCGCGACGCCGTTTCTGATTGGCTCGGCGGCGCTGTTTGGCAGCCTGTTTGCGCGCAGCTT TTTGCACACGGCCCAGCACAGTCGCTGGATCAACCGGCTGCTGCTGGCGCTGGTGGCCTGTGGCGGTGTGGTGATGCTGTTGTCATTGATGACCAGCTAC GCCCTGGCGCTGCGCCTGGCTACCGGCTTGGCGCTGGTGTTTACCGTGACCATCTTCGTCGCCGCCATTAAGGCCTGGTACTGCGGGCAGCGGGTGGCGC GCTATTTCATCATCGCCTGGTCGGCGTTCCTGTTGGGCGGGGTGGTGAATACGTTGATGGTGCTGGGTTACTTGCCCAACGTATTCCTGACCATGTACGC CAGCCAGATCGGCTCGGCGATTGAAGTGGCGTTGCTGTCCCTGGCTCTGGCCGACCGCATCAATTCCATGCGCGAGCAACAGGCGCAGATCCTCTTCGAT GCCAGCCAGAAACTCGAAGTGCTCAACCAGCAGTTGGCCCGCAGTAATCGGCTCAAGGATGAATTCCTCGCCACCCTGACCCACGAACTGCGAACGCCCA TGAACGGCGTGATCGGCTCCCTCGAACTGATGCAGACCGTGCCCCTGGATGCGGACCTGGCGCAATACCATCAAACCGCCGCCGGTTCGGCGCGGGACAT GATGCGCATGGTCAACGGCATCCTCACACTCACCGAGCTGCAGGCTGGTCGCCTGAGTGCCCAGCCCCAGGTATTCAGCCTGCGCGGTACGCTCGACACT TTGCGCCAGCAATTCACCGCCAACGCCCAGAGTAAAGGCCTGGCGTTTTCCATCGACGTGGCGGACGAGTTGCCGGACCGCGTACTGGGTGACGCCGACA AACTGCTGCAGAGCCTGGATTGCCTGCTGGACAACGCCTTCAAATTTACCCACGAAGGCTCGGTGCGCCTGCGTGTGGTGGGTGTGCCCCAGAGTGACGG CGGTCTGCGTTTGAGCTTTATCGTCACCGACACCGGTATCGGCTTTGCTTTCCTCGACGAGGCGACCCTGTACCAGCGTTTCTTCCAGCTGGATGGCTCC ACCACCCGCGAGTATGGCGGCCTGGGTATCGGCTTGGCGATCTGTCGGCAACTGATCGAGTTGCTGGGCGGGCGTCTCACCCATCATTCCGAGCCGCGCA AAGGCAGTCGCTTTCAGCTGGAACTGGAAGTCAGCCCGGTAGCGTCAGACTCCAAGCCAGCGCCGGATCGGCAACGCGCGCCGCAGGAGTGTTCGGTGTT GTTGGTGGATGACAACAGCGTCGGCCAATTGGTCGTGCGCGGCATGCTGCTCAAGCTCGGTTACCGGGTAAAAACCGTGGACACGGGCCCGAACGCGTTG GCGGCTTTGCAAGCGGGGGATTTCGACGCCGTACTGTTGGATATTCCCGAAGGGGGTTTTTCGTTGTGCTGTCAGATCCGTGCACTGCCGGGCTGCGGCG AGTTGCCGGTAATCGCCCTGAGTACGTCGCTGAATGTGTCGGAGCGAGAGCGCTGTCATGGCATCGGCGTCTCTGAGCATCTGGTCAAACCTGTGCGTTT CGAGGCCTTGCAGGCGGTGTTGGAGCGTCGGTTGTTGTGTCCGGCAGAGGGTGAAAGCGCCGCGTATTCGGCGGGTATGCCACTTTTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGTCGTAGCAGTGCTTAACTGAAAAAACCGGCCTCAATCGACGGGCACCGTGCAGGAGCGAGCTTCGATCGAAATGGGCCTTTTTCCAGGAGGCCCGTC ATGAACCTGCATCAGTTTGCCGAAACCCACGACGTCACCAACCAGCCACCGTCCCTGGACGGCACCAACCTGTACCGTATCGATGTGCCCCTGCAGGAAT GGTCGCGCCGCTTTGGTGCCGGCTGGGCGCAAGCGCGCATCGATGCCTATGGTGCGCTGGCCGGCGGGCCGCTGATGGAAGCCGGGTTCCTGGCGAATCA AAACAAACCGGTGTTCAGCAGCCATGATCGTTATGGTCATCGCATCGACCTGGTGGAGTTTCACCCGGCTTACCACGAATTGATGCGCACGGCCGTCGAA CACGGTTTGCCTTCGCTGCCTTGGGCGCATCCGCAGTCCGGCGCCCATGTGGCCCGCGCCGCCATGACCTACCTGCACAGCCAGGCCGAAGCCGGCACCG
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| Amino Acid Sequence |
>sensor histidine kinase
MRYLLIFLLSGLPLFANAIEFNQDTRSLPLGRAIQVLEDPTDALTIADVSAPSATPQFKPHDKDTLNAGYSRSVFWLKVNLHYLPTQAEAQRTWLLELAY PPLDHLDLYLPDSSGTYRLAGRTGDALPFSAREIRQNNYLFKVDFAPGEAKTVYLRLQSEGSIQAPLTLWSSTAYLEQQPLRLYVLGLIYGVLLGMLVYN LFIYLSVRDTSYLYYIFYIASFGMYQLSVNGAAVEYFWPNNPWWANAATPFLIGSAALFGSLFARSFLHTAQHSRWINRLLLALVACGGVVMLLSLMTSY ALALRLATGLALVFTVTIFVAAIKAWYCGQRVARYFIIAWSAFLLGGVVNTLMVLGYLPNVFLTMYASQIGSAIEVALLSLALADRINSMREQQAQILFD ASQKLEVLNQQLARSNRLKDEFLATLTHELRTPMNGVIGSLELMQTVPLDADLAQYHQTAAGSARDMMRMVNGILTLTELQAGRLSAQPQVFSLRGTLDT LRQQFTANAQSKGLAFSIDVADELPDRVLGDADKLLQSLDCLLDNAFKFTHEGSVRLRVVGVPQSDGGLRLSFIVTDTGIGFAFLDEATLYQRFFQLDGS TTREYGGLGIGLAICRQLIELLGGRLTHHSEPRKGSRFQLELEVSPVASDSKPAPDRQRAPQECSVLLVDDNSVGQLVVRGMLLKLGYRVKTVDTGPNAL AALQAGDFDAVLLDIPEGGFSLCCQIRALPGCGELPVIALSTSLNVSERERCHGIGVSEHLVKPVRFEALQAVLERRLLCPAEGESAAYSAGMPLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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