Pseudomonas simiae WCS417, PS417_RS05970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain WCS417. [Details]
DNA Sequence Upstream of Gene
CCCTGGCATCAACACCGAGCCGTTCTGGGGCAAGGATGGTTCGACCATCTACTTCACCTCTGATCGGGGCGGCAAGCCTCAGGTCTACAAGGCGAATGTG AATGGTGGTGGTGCAGAGCGCGTTACTTTCATCGGTAACTACAACGCCAACCCTAAACTGTCGGCAGATGAAAAGACGTTGGTGATGATTCACCGTCAGG ATGGTTTCACTAATTTCCGGGTTGCGGCCCAGGATTTGCAGCGTGGCACCGTAAAAATCCTCACAGATACCAACCTTGATGAGTCAGCCACTGTTGCGCC CAACGGCACCATGGTAATCTACGCCACCCGCCAGCAGGGCCGGGGAGTCTTGATGCTCGTGTCCATTAATGGACGCGTAAGGCTCCCACTTCCTACCGCA CAAGGCGAAGTCAGAGAACCATCCTGGTCCCCTTACCTGAACTGACGCGGCGCTACAAAAAGATTTGCTTAACACACTGGGGTTCATTAGGAGTTTCACG
DNA Sequence for Gene
>PS417_RS05970
ATGGAAATGCTGAAGTTTGGTAAGTTTGCTGCTCTGGCTCTGGCTCTGTCCGTAGCCGTTGGTTGCTCGTCTAAAGGCGGCGACAATGCCGGTGAAGGCG CAGCTGTTGATCCAAACGCTGGTTACGGCGCTAACACTGGTGCGGTTGACGGCTCCCTGAGCGAAGAAGCTGCTCTGCGCGCTATCACCACTTTCTACTT CGAATACGACAGTTCGGACCTGAAGCCAGAAGCCATGCGCGCTCTGGACGTTCACGCGAAGGACCTGAAAGCTAACGGCGCTCGCGTTGTTCTGGAAGGT AACACTGACGAACGTGGTACTCGTGAGTACAACATGGCACTGGGCGAGCGTCGTGCGAAAGCCGTTCAGCGCTACCTGGTACTGCAAGGTGTTGCTCCAG GCCAACTGGAACTGGTTTCCTACGGTAAAGAGCGTCCAGTTGCTACTGGCCACGACGAGCAGTCCTGGGCTCAAAACCGTCGCGTCGAACTGCGTAAGTA A
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCGTCATGCGAACGTGCCGTCGTGCTCTAACTGTATTGGCTCTCAGCCTCGCGCCGCTTGCGGTGTGGGCTGCGGTTCCTGTGGAAGATAGCAACTCTG GCTATACCAATAGCGGGAGCAGTTATCCGCCAGCGGGTTATGGCACGAACGGCGCCTATGCGGGGGGAGCGGCTACGTCCGCTCCCTCGGCACAGGGCGA ACTGTTCAACCAGCTGCAACGCATGCAGGATCAAATCGCGCAGCAACAAGGCGCCATTGAAGTACTGCAGAACCAAGTGAACCAGCTGAAGCAAGAAGGC CTGGAGCGTTACCAGGATCTTGATCGACGCATTGGAGCCGGCGTTCAACCTGCCGCAACTCCTGATAATTCTTCTGCCGGTGGCGCGCCAAGCGCTGCTG CCGGTGGTGCAGCAGCAGGGGCGGCTGCCAGCCAAGCCCCTGCCGCGAGCAGCGAACCGGGTGATCCGGCGAAAGAAAAGCTGTATTACGATGCAGCCTT
Amino Acid Sequence
>peptidoglycan-binding protein
MEMLKFGKFAALALALSVAVGCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGARVVLEG NTDERGTREYNMALGERRAKAVQRYLVLQGVAPGQLELVSYGKERPVATGHDEQSWAQNRRVELRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site