Strain | Pseudomonas simiae strain WCS417. [Details] | |
DNA Sequence Upstream of Gene |
ACACCCGCAACGGCTCGGTGATGTTGATGCGGTCATCGATGTTTTGGTCCAGCAGCAACTGGATACGTTCGCGGGACAGGGTCATGGTCTGCTCCGGGGC CGGCAGCCAGACGAATTCGGCGGTGGGAATGATGCCGTCATCGGCCACGTCCATGCCGAAGGCGTCTTCGCTGAATCGCACGATGTAATGGCCTGTCTTG CGGTTGAGGCCAACAAAACCGTGGAGTTGGTCGGCGGCCTGGCAGATAAGCTCGGAGGTGATGCGCATGGTAAACCTCACTGAAAAGTCCCACAGGAACT GGAAAGATGGTTTACACGCGTGGCGAAAAGCGCCGCCCTCTAACGGGGCAGCTTCGGCCAAGAATACGGCAATGCCCGAGAAAAAAACCGAGAAAATTGA GGGCTGCACACGTTAATGTCGGTTTGGTGATAGCGCCTTTCGCAATCAATTGTTAAAAAGGAGGCCTTCTCAAAGCTACCTCTACGAAAGGACTTCGCCT
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DNA Sequence for Gene |
>PS417_RS06510
ATGCCTGTCACGTCTACCAAGAGCGCCCTGCTGCTCGCCCTGATGCTCGGCCTTGGCCAGGCACATGCGCAAGCCCCTATCAGCCCGGCCGAATTGGCGA CCAACGAAGGCATCCCCTACCCTGCCGTGATCGCCCACCGTGGCGCTTCCTTCGATGCACCGGAATCCACCGCTGCCGCCTACAAGATCGCCCGCGACCT GGGTGCCGACTACCTGGAAATGGACCTGCAGCGCAGCAAGGACGGCGTACTGTTCGCCCTGCACGACAATAATCTGCAGCGCACCACCGACGTGGCCACC AAGTTCCCTGATCGCAAGGACGCCCCGGCCAACGAGTTCACTTGGAAAGAACTGCAAACCCTCGACGCCGGCAGCTGGTTCAACGCCGCCTACCCGGACC GCGCGCGCCCAGGTTTCGTCGGCCTGAAAATCCAGAGCCTGGACGACATCATCAAGATCGCTGAAGGCAACCCTCAGCACAAACCCGGCCTGTACATCGA AACCAAAGAGCCCAAGCAATTCCCCGGCATCGAAGCCGACCTGAAGAACAAGCTGCTCGACAAAGGCTGGCTGAGCTCCGCCGGTTCCAAGCTGGGCAAG AGCAACGTTGGCGTCGGCCAGGGCAAGGGTCGCGTGGTGCTGCAAACCTTCGAAGTGGCCAGCCTGAAAGAGCTGCAGAAAGAAATGCCGAACACCCCGA AAATCCTGCTGCTGTGGGTGGGTGAAGGCAGTATCGAACCGAAGAACAAGCAGACGTTCGCTGAATCCGGCGAAACCACCAAGGCCGCCTATTACGCCAA GCAAGAGCCGAAAGACGCTGCCGAGTTCGAAAAGTGGGTCGACGAAGCCAAGAGCCTCGGCGCCATCGGCACCGGCCCATCGGCTGAGCTGACCAATCAC GGCGACCAGAGCTATTCGGACCTGGTCAAACCGGAAATGAACAAGCTGACCCACGACAAAGGCCTGCTGGTACACGTCTACACCGTGGACGAGCCGGTGG ACTTCGAAAAAGTGATGAAGGCTGGCGTCGATGGCATCTTCACCAACCGCGCCGCCGAACTGCTGAAGTTCTACAAGCGCTGGCCGTCGTCCAGCGTGCA GGATCTGCTGAACGACTATAAGTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGAAGGCCGAATGGTCAGGCCGCCTGTGGTTGGGCCGTGACTACGGCCTGATCCGCGGCGAGCTGGGGCGCACCGCGCCCCATGCGCACTACGCCCACC AATTGATGTTCTCCACAGGCTCACCGATCACGGTCAGCCTCGACGGCCAGGTCACCACGGCCCACCGCCTGTTTATCCCATCGCGACAGACTCACGCCAT TCTTGAGACTCAAGGTGAGGTCTCGGTGCTGTACGCCGAACCTGCCGTGTTTGATATTGCCCCTTTGCTGCACCAGGACCTCTCCCTGGAGGCAATGCGT CGACTGCCTCGGCGCAGCCTGGATGATCCACGTCTGGAGCGCGCCCTCGCCGCACTGGATCAACACCTCGCCGGCAAAGTCTCGGCCCAGGCCCTGGCCC AGGCCGCGCACCTGTCATTGAGTCAACTGGAACGACTGTTCGCCCACCAACTCGGTTTGCCTGTGCGTCGCCTGGTGCTGTGGCGACGATTGCGCATCGC
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Amino Acid Sequence |
>glycerophosphoryl diester phosphodiesterase
MPVTSTKSALLLALMLGLGQAHAQAPISPAELATNEGIPYPAVIAHRGASFDAPESTAAAYKIARDLGADYLEMDLQRSKDGVLFALHDNNLQRTTDVAT KFPDRKDAPANEFTWKELQTLDAGSWFNAAYPDRARPGFVGLKIQSLDDIIKIAEGNPQHKPGLYIETKEPKQFPGIEADLKNKLLDKGWLSSAGSKLGK SNVGVGQGKGRVVLQTFEVASLKELQKEMPNTPKILLLWVGEGSIEPKNKQTFAESGETTKAAYYAKQEPKDAAEFEKWVDEAKSLGAIGTGPSAELTNH GDQSYSDLVKPEMNKLTHDKGLLVHVYTVDEPVDFEKVMKAGVDGIFTNRAAELLKFYKRWPSSSVQDLLNDYKY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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