Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TATGCCAGGGGCGCTGGAAGGCGCGCGCGCGATTCAGCAGGAGCTGGGTGACAGCGGTAATGCGCCTGCGCGTCCGCACTTTGCCGACTTCATGGTGCGC TCGGGCTTCGTCAAGGATCGCGCCGAGGCATTTCGCAAATGGCTGGGCGCGGGCAAACTGGGCGATGTGAAACAGCACTGGCCGACGCTGGAAGACACGG TAGCCACCTTGCGGGCGTCGGGTGCATGGGTCAGCCTCGCACATCCTTCACATTATGACTTTACCCGCAGTAAACGGCGTAAACTGGTCGGCGATTTCGT CCAGGCCGGTGGGCACGCCATAGAAGTGGTCAATGGCATGCAGCCTGCCGATCAGGTCGGCACCCTGGCCATCCTTGCCCGCGAGTTCGGTCTGCTGGTT TCCGCCGGCAGCGACTTCCACGGTCCTGGCACCTGGGGCGAAATCGGCACTTATCGCCCCGTGCCTGAAGATCTACCGCCTTTGTGGTGCAGATTCAAAC
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DNA Sequence for Gene |
>Psyr_3585
ATGAACAGCCTACTGCCTCCGTCTGAACAGGAAGTAATCGTGAGTCAATTTTTCCAGGTCCATCCGGAAAACCCGCAGCCGCGCCTGATCAAACAGGCCG CTGAAATCATCAAGGCCGGCGGGCTGGTGGTGTACCCGACAGATTCGTCCTATGCACTGGGTTGCCAGATCGGTGACAAGAGCGCCATCGAGCGTATCCG CCGCCTGCGCCAGCTGGACGACAAGCACAACTTCACCCTGATGTGCTGTGATCTGTCGCAACTGGGGCTGTTTGCCAAGGTCGACACCGGCGCGTTCCGC GCACTGAAGGCGCACACGCCAGGGCCATACACCTTCATTCTCAACGCCACCCGCGAGGTGCCGCGTCTGGTGCTGCACCCCAAGCGCCGCACCATCGGCC TGCGTGTGCCAAGCCATCCCATCGCCCAGGCCCTGCTGGAGCAATTGGGCGAGCCGCTGATGAGCGTCAGCCTGATCATGCCGGGCGACAGCGTGCCCCT CAGCGATCCCTATGAGATGCGCCAGGTTCTCGAGCATCAGGTCGACCTGATCATCGATGGCGGGATCGGCGGTATTTCGGCGTCCACGGTCATTAACCTG GCTGAGGGTGAACCCCAGATCGTTCGGGTTGGTTGCGGTGATCCGACGCCTTTCGGTGAACGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGACAGCCGTCGAGTCGGTGGACAGCCAGGCAGACGCCCAGCAGGAACTGCCGTTCGCGCTGGTCTATGGGCGTGCTGTCACGCAGATGCCGCTGGACCT GTACATCCCGCCCGACGCGCTGGAGGTTTTTCTCGAAGCGTTCGAAGGGCCGCTCGACCTGCTGCTGTACCTGATCCGTAAACAGAACATCGACATCCTC GATATTCCCGTGGCCGAGATCACCAAGCAGTACATGGGTTACGTCGAGCTGATGAAAACCGTGCGGCTGGAGCTGGCTGCCGAGTATCTGGTCATGGCCG CCATGCTGGCCGAGATCAAATCGCGCATGCTGTTGCCGCGTTCGGCGGAAGTCGAAGAGGAAGAAGGCGATCCGCGCGCCGAGCTGATTCGCCGCTTGCA GGAATACGAGCGCTTCAAGGCGGCCGCCGAGGGCATCGATGGCCTGAGCCGGGTGGGGCGCGATGTCATCGTGCCAAAACTGGACGCTCCCGAAGCCCGT
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Amino Acid Sequence |
>Sua5/YciO/YrdC/YwlC
MNSLLPPSEQEVIVSQFFQVHPENPQPRLIKQAAEIIKAGGLVVYPTDSSYALGCQIGDKSAIERIRRLRQLDDKHNFTLMCCDLSQLGLFAKVDTGAFR ALKAHTPGPYTFILNATREVPRLVLHPKRRTIGLRVPSHPIAQALLEQLGEPLMSVSLIMPGDSVPLSDPYEMRQVLEHQVDLIIDGGIGGISASTVINL AEGEPQIVRVGCGDPTPFGERA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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