Strain | Pseudomonas simiae strain WCS417. [Details] | |
DNA Sequence Upstream of Gene |
ATTCCTGATCGATAAATCCGCCTGCCAGCTGTTGATCGACTTGCAGGACAAACGCCACACCTGCTCCCTGCCGGTTGCCGACGCCCCCGCCCTGCCCGAT GCACCGATTGACCCACCCAAGCCCCGAGGCCGCGCCGACGCCAGCGTCCCTCTGGTGAAACTGGCCGTGGCGCGTTCCGGCGACAAGGGCAACCACAGCA ACATCGGCGTGATCGCCCGCGACCCCGAGTACTTGCCCTGGATCGCCGAAGCGCTGACCCCGGAAGTGATCGTCGACTGGATGGGCCATGTGCTGGACCC CGTTCACGGTCGCGTCGAGCGCTGGTATTTACCCGGCAGCCACAGCCTCAACTTCCTGCTGGAAAACGCCTTGGGCGGCGGCGGCATCGCCAGCCTGCGC ATCGACCCGCAGGGCAAAGCCTTCGCCCAGCAACTGCTGGAAATCCCCATCGCCGTGCCGCAACACATCGCAGATTCACTCACCTGACAGGAGCGTTGCC
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DNA Sequence for Gene |
>PS417_RS08740
GTGGCCTTCGACTCGATCTTCAAAGCCAACCTGTTCCACGGGCACACCGTGATGGTCACCGGCGGTGGCAGCGGTATTGGCCGCTGTACCGCCCATGAGT TGGCGGCCTTGGGTGCCAAGGTGATCCTGGTGGGACGCAAGCCGGAAAAGCTGCAAAACGTCGCGATCGAGATCGCCGAAGATGGCGGCAGCGCCGCGTG GCAGGCGTGCGACATTCGCGATGAAGAGGCCGTAAAGGCGCTGGTCAAACACATCATTCATGCCCACGGCCCGATCCACGGCCTGGTCAATAATGCGGGG GGCCAATATCCGTCACCGCTGGCGGCGATCAACCAAAAAGGCTTCGAAACCGTAATCCGCACCAACCTCGTCGGCGGCTTCCTGGTGGCGCGGGAAGTGT TCAACCAATCCATGAGCAAGCATGGCGGCGCCATCGTCAACATGCTCGCGGACATGTGGGGGGGCATGCCCGGCATGGGCCACTCGGGTGCGGCGCGCGC GGGCATGGACAACTTCACCAAGACCGCCGCCTTCGAATGGGGTTACGCCGGGGTACGGGTCAATGCCGTGGCGCCGGGCTGGATCGCCTCCAGCGGCATG GACACCTACGAAGGCGCGTTCAAGGCGGTGATCCCGACCTTGCGCGAACACGTGCCGCTCAAGCGCATCGGCACCGAATCGGAAGTCAGCGCGGCCATCG TGTTCCTGCTCAGCCCCGCCGCCGCCTTCATCAGTGGCAGCACTTTGCGCATCGACGGTGCGGCCAGCCTGGGCAGCCGCGCCTGGCCGTTGCACAAGGC GCAGGCACCGAGCGAACCCTTCAATGGCTTTCACCGTGCCTACCTGCCGGATGTGCTCAAGGCGGAGAAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCATGCCGGTAATCGAGTCCTTGATCGACACCCACCACGCCCAGTTCGCGCAAAATCGCGAGGCCATGCTGGCGGCCATCGCCCACCTTCACCAGTTGG AACACACCCTGCTCGCCAAGGCTCAGGAAGCCAAGCCCAAGTTCGACAAGCGCGGCCAACTGCTGCCCCGCGAGCGTCTCGCCCTGTTGCTGGACCCCGG CGCGCCGTTCCTGGAACTGGCCAGCCTGGCCGGCTACAAGCTGCACGACGACAAGGATGGCAGCGCCGCCGGCGGTGGGTTGATCGCCGGCATCGGCTAC GTCAGCGGCGTGCGCATGCTGGTGGTGGCCAATAACAGCGCGATCAAGGGCGGCACCATTTCCCCCACCGGCCTGAAGAAATCTCTGCGCCTGCAACACA TCGCCATGGAGAACAAACTGCCCGTGGTGACCCTGGCCGAAAGCGGCGGCGCCAACCTCAACTACGCCGCCGAGATTTTCGTCGAGGGCGCGCGCAGCTT
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Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MAFDSIFKANLFHGHTVMVTGGGSGIGRCTAHELAALGAKVILVGRKPEKLQNVAIEIAEDGGSAAWQACDIRDEEAVKALVKHIIHAHGPIHGLVNNAG GQYPSPLAAINQKGFETVIRTNLVGGFLVAREVFNQSMSKHGGAIVNMLADMWGGMPGMGHSGAARAGMDNFTKTAAFEWGYAGVRVNAVAPGWIASSGM DTYEGAFKAVIPTLREHVPLKRIGTESEVSAAIVFLLSPAAAFISGSTLRIDGAASLGSRAWPLHKAQAPSEPFNGFHRAYLPDVLKAEK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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