Pseudomonas simiae WCS417, PS417_RS11860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain WCS417. [Details]
DNA Sequence Upstream of Gene
GGGCAGGTCTGGGGCTGGATCAAGAACAAGCAACTGGACAAGGAAAAGCTCAAGGAACTGCGCGCCAACTCCCCGTTGGGTGAAATCCTTGCTGCAGGCC TGGCCAACTCCAAGCACGGTCGCGAGATCATGAAGGAGTGCATCGAAGAGGCCGCCGCCCGCGTCATTCATGAGCTTGAGCGTTATATCAATGCTCTCGG CACCATCGCCGCGATGGCGCCGTTGCTCGGCTTGCTCGGCACAGTGCTGGGTATGATCGATATTTTCAGCTCATTCATGGGCGCCGGCATGACCACCAAC GCGGCCGTACTGGCCGGCGGTATCTCCAAAGCGCTGATCACCACAGCCGCAGGCTTGATGGTGGGTATTCCTTCGGTGTTCTTCCACCGATTCCTGCAAC GTCGCATTGATGAGCTGGTGGTCGGCATGGAACAGGAAGCCATCAAGCTGGTGGAAGTGGTGCAAGGCGACCGTGACGTCGACCTGGTTGGGGGCAAAGC
DNA Sequence for Gene
>PS417_RS11860
GTGAAATTTCGCCGCAAGCAACGGGAAAACGTCGATATCAACCTCGCGTCGCTGATTGACGTGGTGTTTATCCTGCTGCTGTTTTTTGTCGTCACCACCA CCTTCACCCGGCAGACCGAGCTGCGCGTCGACCTGCCGGAAGCCGTGAGCGGCTCGCCGGCCGAAGACCAGCAAGTCAAGCAATTGGACATCGCCATCAG CGCCGACGGGGTGTTTTCGGTGAACAACCAGTTGCTTGAGAAAAACGACCTGGCCAGCCTGATGGACGCTTTGCAGAAAGAGTCCGGCGGCGACACCAAG CTGCCACTGTCCATCAGTGCCGACGGTAAGACCCAGCACCAGGCCGTGATCACCGCGATGGACGCGGCCGGAAAGCTCGGTTTCAGTCATCTGCGCATGA CCACCGTCGAGGCGGCGGGCCAACCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGCCATGTCCGATCGTTTGCTCAAGGCCTGGTACGAGGGCCATCCGGCACTCACGCTGCTGCGCCCGCTGGAGTCCTTGTACCGTGGAGTTGTGCAGCG CAAGCGTGCGCGCTTCCTGGCGGGTGAGGGCGAGATCTATCAATCGCCGGTGCCGGTGGTGGTGGTCGGTAATATCACCGTGGGTGGCACTGGCAAGACG CCATTGATCCTGTGGTTGATCGAACATTGTCGACGCAGCGGCTTGCGCGTGGGGGTGGTCAGCCGCGGTTATGGCGCCAAGCCGCCACAGTTGCCATGGC GGGTTGAAGCCAGCCATAGCGCCGAAGTGGCGGGTGACGAGCCTTTGTTGATCGTGCAGCGCTGCGGCGTCCCGTTGGTGATCGACCCCAATCGTAGCCA TGCAGTCCAGGCGCTGCTGGCCAGCGAAACCGTGGACCTGATCCTTTCCGACGACGGCCTGCAGCACTACCGCCTGGCCCGTGACCTTGAACTGGTCCTG
Amino Acid Sequence
>biopolymer transporter ExbD
MKFRRKQRENVDINLASLIDVVFILLLFFVVTTTFTRQTELRVDLPEAVSGSPAEDQQVKQLDIAISADGVFSVNNQLLEKNDLASLMDALQKESGGDTK LPLSISADGKTQHQAVITAMDAAGKLGFSHLRMTTVEAAGQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site