Strain | Pseudomonas simiae strain WCS417. [Details] | |
DNA Sequence Upstream of Gene |
CTGGCGATAAACCACTTGAACAGGCTGCCGTCATCGCCAGGTTTGAGCTCGATGCCCAACTCCGACGCAGAAATAGAACGGGCCATGTTCAGTGGCCCAG CTTGCGCTCGGCCTTGGCGGCCTGTTCGTTGATGGCATCGGTCTGGCGCTCGGTGTCCTTGATCGAGGTGGGGGTCAGCACTTTATCGACGGTTTCGGTC TTGGGATTCGGGCGTTCCAGGGTCTGGCCTTTTGTGGCTTTATCAGTGCCCTTCTGAGTTTCTTCGGAACTGATGGGGGCTGGGGTCTTATCGGCAGTCA TGGTGGTTCTCCAATCAATGGCGCGGGTAAAAATAGCGAGCGCCTATGCAGCAGAAGCCTGCGGCCCTGGATAGTTCAAGGAAATTGCCCGCGCCAACCC GGTGCAAATTTGCTGAAAATTAATTTAAACCTTTGCCACCCGACCCGGATCAACTCTCCCATATCCCATCCTTCGTACACCCATCAGGAGACATTCGATC
|
|
DNA Sequence for Gene |
>PS417_RS12525
ATGAGTTCAAACCTTAACGGCAAGAAGATTCTGGTCATCACGTCCAACACCGGTATCGAGCGCGATGAACTGCTCAAACCATTGGCAGCGCTGCGCGGTT ATGGCGCGACAGTGACCCACGGCTCCAGCACAGGCGGCATCACCCAGACCTTCGTCGGCGATACCGAGAAAGACACGACGGTTGAGTCCGATGCGAAGCT GTCCGAGCTGTCGGGCAGTGAATTCGATGCACTGGTGATCCCTGGCGGCACCGTCAACGCTGACACATTGCGCCAGGATGCAGCGGCGCAGAAGTTGATC AACGAGTTCGTCAAGGCAGGCAAAACCGTGGCGGCAATCTGTCATGGCCCCTGGGCGCTGATCGATGCCGGTGTGATCAAAGGCAAGACCCTGACCTCCT ACAAGAGCGTGCGCATCGATCTGGAAAACGCCGGCGCCGCCGGATGGGTCGATGAAGAGGTCAAGGTCTGCAAAGCCAATGGCTGGACCCTGATTACCTC ACGCACCCCGGATGATCTGCCGGCGTTCAATGAGGCGATCGCCAAGGCATTGGCAGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TAAGCCTACCGCGCAACGAAAACAGGCGCCTCGACGGCGCCTGTTCTCTATCTACTTCTGCCTCAGCTTTTATGCTGCTGCGGCATTTCGCGTTTCGGCC CGAACATCGCCCAAGCGATAAGGCCCAAAAGTGGCACAAAGATAAGCACCACCACCCACAATCCTTTGGTCTCCCAGCCCCCAGTGCTGCGCAATACGAT ATTGATCGCCCACAATTCCAGTAGCAGTAGAACCACCGCCAAACCGATCCAGATATATTGAATTTCCATGCTTCACCTCCTAGGTCGTACACGTTAGGTC AAGTGTTTAGCGCGAGGGTTCATTAAAATTTGCGCGAATGTCCCGGGGTTGTGGAATGCAACGTGCAACCGCACCGACCATGCAACCTGCACGACAGGTT CAGTCGCCATGTCATCGTAGGCCTTTGAATTTCCTCACGAATTAAAAACAGCTCAAGTTGGTACAACTGATGCACTCCTGTCATGGACGAGGTGTGCATG
|
|
Amino Acid Sequence |
>glutamine amidotransferase
MSSNLNGKKILVITSNTGIERDELLKPLAALRGYGATVTHGSSTGGITQTFVGDTEKDTTVESDAKLSELSGSEFDALVIPGGTVNADTLRQDAAAQKLI NEFVKAGKTVAAICHGPWALIDAGVIKGKTLTSYKSVRIDLENAGAAGWVDEEVKVCKANGWTLITSRTPDDLPAFNEAIAKALAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|