Strain | Pseudomonas simiae strain WCS417. [Details] | |
DNA Sequence Upstream of Gene |
ATCGAGGCCGTTGGGCGGTGCCTGCGAGGCCTCGACAGCCAGTTACAACCTGCCGATGGCGTGGCGGGCATCATGGGCAGTACGGTGGTGGTTTTGTTAC TGGAGCACCATCGCGCCGCCTGTGTCTGGGCAGGGGATAGCCGATGCTACCTGTGGCGAGGGCAGCGGCTGTATCAACTGTCGCGGGACCACTCTCTGCA GCAGCAACTGATAGACACGCAACAGTTGAGCCCGGAACTGGCCCAGGCTCATCCTGGCGCAAGAGCCTTGACCCGTGCGGTGGGAGCCAGGCAGCCATTG AGCCTTGAGATATTGGAGCTGCGCGCCCAGCCCGGTGATGTGTTTTTGTTGTGCAGCGACGGTCTGTACCAGGGGCTCAGCCATAAGGAGTTGGGGAGTG CCATGAGCGCAGGCACGCCACGGCAGGTGGTGGATCGGTTGTTCCGTGGCGTGCTGCAGGGGCCGGCACGGGATGACCTGACCGCCGTGGTAGTCCAGCC
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DNA Sequence for Gene |
>PS417_RS12910
ATGAGCGCAGCGGCAGGTCCGCCGAACTTGCTGGCGGGGCGCTATCAGCTTGAGCGGATCCTCGGCACCGGGGGCATGGGGGTGGTCTATCGCGCGCGGG ATCTGCTGCATGAAGCTTTCGGCGAGCCAGACTGCCGTGTGGCGCTGAAATTGTTAGGCGAGAGCCTATCCGCCTCCACCGACGCGCATGTGCTTCTCTA CAGCGAGTTCGCCCTGACCCGAAGCCTGCGCCATGATCACGTGGTGCGTGCATTTTCGTTCGAGGTAGACACAGCCCTCCAAGTGGCATTCTTCACTATG GAAGTGATGCCTGGACTGACCCTGGATCGCCTGCTCCAGGAGTGTCCTCAAGGACTGCCATGGCAAGAGTTGCAACCCATGGCCCTGCAACTGCTGGAAG CACTGGCCTACACCCACCGGCAGGGTGTCCTGCATGGCGATGTGAAACCGGCGAATATCATGGTTGGGGAGCAGGGGCTACGCTTGTTCGATTTTGGCTT GGGTCACGCGCAAGCCCAGGCAGAGGCGGGCTTGCCGGCTTTGAGCCGCAACCGGCTGAATGCCTGGACGCCGGCGTATGCGGCACCGGAGCTGATAGCA GGAGGATTGCCGTCGGCTAGCGCCGACTTGTATGGGGCGGCCCGGGTGCTCTATGAGATGGCCGAAGGACGGCGGCCTGTAGAGCCTCAACGCAATCAAC GATTGCCGCGACCCAGGCAACTGCCCAGGCAGTACTGGCCGTTGTTACGTTCAGCATTGGCCATTGACCCTGTGCAGCGAACCGTCGATGTTGCCGAGCT GTGCGAGGGCTTGGCAGCCCGTCGGTGCCTATGGTTCAGGGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGTCAACCGGCCACATCATGTATCCGGCAGTATTCGTCCCAGCTCAGCCCCGCCATCTGTGCTACTTCCTTGTGGACGTCAAGGCGTTGGGTTTCAAA GGCTTCGGGGGACTCGGCGGTCAGTTTCAGCGTCAACTCCCAAGCAAACAGGCCCTGACGTTCGGCTTCGGCTTCGAAGGCTTCATGCAGCCGTTCGGCG CGGTAGTGTGCCAGGGTTTCGCCCTTGGCTTGTGCGGCCAGCGGGTTCAAGGTCTCGAGTTCTGCGGCAACATCGGGGTGTTCGTTGAGGAATCTGTCCA GTGCCAACTGGTGGTTATCGCCGGGTGGTGACAAGGGCTTACTCCATTCAATGGCCGGGCTTTGGTCCGTGGCCTGCCGCGAGGCGGCGGGTGCGTTTGT ATCGCCGGCGGTTGGTCCAGGCACGCATAGGATTGAGTAAAAACAATAACAGGAAGGTCATCAGCACCGAAGCAGATTTAGTGAGTGGCCCACGTCACAA
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Amino Acid Sequence |
>serine/threonine protein kinase
MSAAAGPPNLLAGRYQLERILGTGGMGVVYRARDLLHEAFGEPDCRVALKLLGESLSASTDAHVLLYSEFALTRSLRHDHVVRAFSFEVDTALQVAFFTM EVMPGLTLDRLLQECPQGLPWQELQPMALQLLEALAYTHRQGVLHGDVKPANIMVGEQGLRLFDFGLGHAQAQAEAGLPALSRNRLNAWTPAYAAPELIA GGLPSASADLYGAARVLYEMAEGRRPVEPQRNQRLPRPRQLPRQYWPLLRSALAIDPVQRTVDVAELCEGLAARRCLWFRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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