Pseudomonas simiae WCS417, PS417_RS14140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain WCS417. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGTGCTGTCCCTGGCGTTCTACGGCATGTCGACGTTCGAGGGGCCGATGATGGCGATCAAGACCGTCAATGCCCTCTCCCACTACACCGATTGGACC ATCGGCCACGTACACGCCGGGGCCCTGGGGTGGGTCGCGATGATTACCTTTGGTTCGCTGTACCACATGATCCCCAAAGTGTTCGGGCGCGAGCAGATGC ACAGTGTGTCCCTGATCAACCTGCACTTCTGGCTCGCGACCATCGGCACCGTGCTGTACATCGCTTCGATGTGGGTCAACGGGATTACCCAGGGCTTGAT GTGGCGAGCGGTCAACGATGACGGCACCCTCACCTACTCCTTTGTCGAAGCCTTGCAGGCCAGCCATCCGGGGTTTGTGGTGCGATTTGCCGGTGGTGTG TTCTTCCTCACCGGGATGGTGCTGATGGCCTACAACACATGGCGTACCGTGCGGGTCGCAGACGTGAACATGGCGCAGCTTGATGCGCGGATCGCCTGAG
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| DNA Sequence for Gene |
>PS417_RS14140
ATGTGGGGCCTGCTGATGGTGGTGTGCCTGTATGGCGCGGTGGAGTACTGCTTGCGCGGTCAGTCGCAGAAGAGCCTGGACGATGCCAGCTTGATGCCCT TTGCCGATGATCCTGAGGTGGCGCGGCGCGTGGAGCTGGCGACCGGCAAGCCCATCAACGCGGTGGCGCCGGAGGACGCCAAGCCGGGCTGGGTTAACCT GGACATGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACTGCACCGGTCATTTCGCGGCCAACTGCGTATGACTAATTGCCGGCCGATGGGTAAGGTGAGGCGACTTTCCGAGTGAGGAACATCGCATGCGCACCA TCGGCCTTATCGGCGGCATGAGCTGGGAGTCCAGCGCCGAGTATTACCGCATCATCAACCAGCGCGTGCGCGACCAGCTCGGGCCGCTGCGCTCGGCGCA ACTGTTGATGTACAGCGTGGATTTCGGCCCGGTGGAACAGGCTCAGCACGCCGGCCGCTGGGATGACACTGCACTGATCCTCGAAGATGCCGCGCGCCGT CTGCAAGCTGGCGGGGCCGAGTGTGTGGTGCTGTGTACCAACACCATGCATTTGGTCGCGCCGCGCATTGAAGCAGCGGTGTCGATCCCCTTCCTGCACA TCGCTGATGCGGCGGGTGCGGCGGCCGTGAAGGCCGGCACGCTGACCGTCGGCCTGCTTGGCACCGCGTTTACCATGGAGCAGGACTTTCTCAAATCACG
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| Amino Acid Sequence |
>hypothetical protein
MWGLLMVVCLYGAVEYCLRGQSQKSLDDASLMPFADDPEVARRVELATGKPINAVAPEDAKPGWVNLDM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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