Pseudomonas syringae pv. syringae B728a, Psyr_3364 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGTTGACGAAGCCCAGCATCACCGGATACGGCACCAGCCGCACCAGTTTGCCGAGCCGCAGCAAGCCGAACAGGATCATGATCAGACCGCCTAGCAATA CGGTCGCCAGCAAATACTGCACGCCCTGCTGAACCACCAGCGCGACGATCACCACCGCCATGGAACCGGCCGCACCGGACACCATGCCCGGGCGCCCGCC GAACAGCGCGGTCAGCGTACAGATGATGAATGCGCCGTAGAGCCCCATCAGCGGATTGAGATGGGCCACCAGCGCAAAGGCGATGCACTCGGGCACCAAT GCAAAAGATGTGGTGAGGCCTGCCAGAACGTCGGCACGTATACGGATCGTTTTCATGGGTTACCTGAGCGGCGCTCCATGGAGGAAGCGCAAAAAAGGGG GCATATTACGCAAACCTTTGACGACCGACCACCACGGTGGGGCTTCCAGGAAAGCTCTCTGATGATCGGCCCATGCCTCAAAACAACAAGGAGTAAACCG
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| DNA Sequence for Gene |
>Psyr_3364
|ampC
ATGCAATGGAATGGAGCGCTGCTCTGCACAGGACTTCTGCTGGTCAGTGCAGTGGCTGTTGCCGACGACGACACAGCGTCTGTCGACGCATTCGTGCAGG CAGAAGCCAGTAAAGTGATGCAGGAAAATCATATCGCGGGCCTGTCGATTGCCGTCACTCGCCAGGGCAAACAGCAGTTCTACACCTATGGCGTCGCGTC AAAAGCCACCGGCCAGCCAGTGACCCGCGATACGCTGTTTGAACTCGGCTCGATCAGCAAGACCTTCACCGCCACCCTCGCTACCTGGGCGCAGGCCAAT GGGCAGCTGTCGCTGACGCAAAGCATCGACAGCTATATTCCGCAGTTGCAGGCCACGCGGCTGGGCAAGGTGCCAATTTTCCATCTGGGCACCCACACGG CTGGCGGCTTCCCGCTTCAGGTGCCGGACAAAGTGCAGAACACCCGTCAGTTGATGGAATATTTCAAGGCCTGGCAGCCCGAATATCTATCCGGCACCCA TCGCACGTACGCCAACCCCAGTGTGGGCCTGCTCGGCATGGTTGCAGCGCGCAGCATGCAGCTGCCGTATGAACAGGCCCTGCAGCAGCGGCTGTTTCCG GCGCTGGGTCTGAGTAACACCTATATCAACGTACCCGATGAAAAACAGGCGCTGTATGCGCAGGGCTACAACAAACTCGACGAGCCGGTCAGGGTCAATC CAGGTCCGCTGGCGGCTGAAGCCTACGGGGTGAAATCGAGCAGCAGCGACTTGCTACGCTTCATCGAAGCGAACATCGGCCTCGGTCAAAACGACGCCGC GCTGCAAAAAGCCCTGCGCGATACCCGGACCGGCTATTTCAAGGTCGGCGGCATGACTCAGGACCTGATCTGGGAGCAGTATCCGCTGCCGGTTCGTCTG GAGACGCTGCTTGAGGGCAATGCCAGCGCCATGCTGAACACGGTCAAAGCCGAAATGATCGAACCGCCGCAGGCAGCGCAATCTTCGGTCTGGGTCAACA AAACCGGATCAACCAACGGTTTCGGCGGCTATGTGGCGTTCATTCCGGAGCAGCAGTTGGGGATTGCCATCCTCGCCAACAAAAACTACCCGAACGAGGA GCGGGTGAAACTGGCCTATCGGATTCTGCAGAAAATGGGCTGCTGCTCAACGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAACAGCCCTGCCCCTTCGGCCGCTTCGATTTCAAGCAGCTTGCGCTTGCGCTCGACGCCCCAGCGGTAGCCCGACAACGATCCATCGCTGCGCACCACG CGGTGGCAGGGAATCGCCACCGCGAGCTTGTTCGCACCGCAGGCGTTGGCCACCGCACGGACTGCACTGGGCAGTCCTATCTGCGTCGCGATCTGCGTAT AGGTGGCCGTCGATCCGGCAGGAATGTCCCTCAGCGCCTGCCAGACCCGCTCCTGAAACACCGTGCCGCGGATATCCAATGGCAGCGCCAGGCCGGTCGC AGGTGATTCGACAAAACCCACGACCTCGGCAACCAGTTGTTCGAACGCGGCGTCTGCACCGATCAGGTTGGCGTTGGGAAACTGGTCCTGGAAAGCTTCG ATCAGCGCATGCGGGTCATCACCGAGCGAAATCGCACAGATACCCTTGCTGCTGGTGGCCACCAGAATCGAACCCAGCGAACTTTCACCCAGAGCGAACC
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| Amino Acid Sequence |
>beta-lactamase
MQWNGALLCTGLLLVSAVAVADDDTASVDAFVQAEASKVMQENHIAGLSIAVTRQGKQQFYTYGVASKATGQPVTRDTLFELGSISKTFTATLATWAQAN GQLSLTQSIDSYIPQLQATRLGKVPIFHLGTHTAGGFPLQVPDKVQNTRQLMEYFKAWQPEYLSGTHRTYANPSVGLLGMVAARSMQLPYEQALQQRLFP ALGLSNTYINVPDEKQALYAQGYNKLDEPVRVNPGPLAAEAYGVKSSSSDLLRFIEANIGLGQNDAALQKALRDTRTGYFKVGGMTQDLIWEQYPLPVRL ETLLEGNASAMLNTVKAEMIEPPQAAQSSVWVNKTGSTNGFGGYVAFIPEQQLGIAILANKNYPNEERVKLAYRILQKMGCCSTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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