Pseudomonas simiae WCS417, PS417_RS21270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain WCS417. [Details]
DNA Sequence Upstream of Gene
CGGTAGCTGTTGTTGAGCTCCAGCTCGATCTGTACCTGCGGGTACTGCTTGGAAAACTCCAGCAACAATCCGTCGAAGAAGGTCTCGCCCAGCGACACCG GCACCGTCATGCGTACCGGCCCAGCCAGATCATCCTTGAGCCGGGCCAACGCCTGTCGGGCACGATCCACCTGCACCACCAATGCCTGGGCCTGGGGCAG CAACGCTGCGCCGGCCGCGGTCAGGCTAAGCTTGCGGGTGGTGCGGTGCAGCAATACCACGGAAAACCGCGCTTCCAACTGGCTGATCCGCTTGGACAAC TGCCCTTTGCTGCAGCCCAATTGCTCGGCGGCCACGGTAAAACTACCGGCTTCGATCAGCACCGCAAACGCGGCCAGGTCATCCATGTCACTCACGGATT GTTTCCATTTGAAAACCAAAGGTTGCCTATTAGCACGTTTATTCGCAAAAAAAGCCACTCTAGACTGAACCCTCACTTAACTCCCTGGAGGAACAGCACC
DNA Sequence for Gene
>PS417_RS21270
ATGAAAATCCTATTGATTGGCGCCAGCGGCACTGTCGGTTCAGCGATCAAGGCGGAACTGGCCCAGCGTCACGACGTGATCAGCATCGGCCGCAACAGCG GTGACTTCCAGGTGGATATCAGCGACAGCGCGTCGATCCGCAAACTGTTCGAACAGACCGGCAAGTTCGATGCCCTGGTCTGTGCGGCAGGCAGCGTGAA GTTCGTGGCGCTGGGCGAGATGAGCGAAGGCGATTTCGAACTGGGCCTGCGTGACAAACTGATGGGCCAGGTCAACCTGCTGCTGATCGGCCGCGAATAC GCCAACGATGGTGCCTCGTTCACCTTCACCAGTGGCATTCTGAACCGCGACCCAATTCGCACCGGGGCTTCAGCTGCGCTGGTCAATGGTGCGCTGGATG CTTTCGTCAAAGCAGCGGCAATCGAGCTGCCACGTGGCCTGCGTGTCAACTCGGTGAGCCCGACGGTGTTACTGGAAGCCATGGACAGCTACGCACCGTA CTTCCGTGGCTACAAACCGGCGCCGGGCGCCGACGTGGCATTGGCCTACGCAAAAAGTGTGGAAGGCTTGCAGACCGGCCAGACGTTTATCGTGGGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAGGCTGCCTGTCAGAATTACCTGAAGCTAACGGGCGGGGTTGTGATGCAGCGCAGGCCTGCGTAACGTGGCGGCACTTGTCTGGAGACCCGATAATGC GTGCCGCCCATACCCTTGCCCTACTTGCCTTGCTTCCCCTGTTTGGCGCCTGCCAGATGTTCGATAACGATCCGGCCAAGCCTTCTACGGCCGGGCTGAC CCGAATGCAGGGCGAACTCACCGCAGTCGGCGGCAAACTGCTGTTCCAGCCGTGCAATGACAAACGCAACTACGTGGTCAACGACACCGGCGGCACCAGC ATCCTGCAGGAAGCGGCCTCCCTCGCCGGCGAGCAAGGCGCGTTGTTTGCCGACCTGCGTGGCAAGTTCTCCGGGGTCGCCAGCGGCACCCAGGGCAGCG TCGACCTGCAACAACTCTACCGCGTCGAGCGCTCGACGTCGGCCTGCGACGACCCGGACTTCAAACGCATGATCCTGCGCGCCAACGGCCACAAACCGAC
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGASGTVGSAIKAELAQRHDVISIGRNSGDFQVDISDSASIRKLFEQTGKFDALVCAAGSVKFVALGEMSEGDFELGLRDKLMGQVNLLLIGREY ANDGASFTFTSGILNRDPIRTGASAALVNGALDAFVKAAAIELPRGLRVNSVSPTVLLEAMDSYAPYFRGYKPAPGADVALAYAKSVEGLQTGQTFIVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site