Pseudomonas simiae WCS417, PS417_RS22965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain WCS417. [Details]
DNA Sequence Upstream of Gene
CGCGCCGCCGACCAACCGCGCGCCGAGCTGTTGCTGGGCAAGCTCTACTACGAAGGCAAGTGGGTGCCCGCCGACGCCAAGGCCGCCGAAGCACACTTCG AAAAAGCCGTGGGCAAGGAAGTGGCCGCCGATTACTACCTCGGCCAGATCTATCGCCGTGGCTACCTGGGCAAGGTTTACCCGCAAAAAGCCCTGGACCA CTTACTGACCGCTGCGCGCAATGGCCAGAACAGCGCCGATTTCGCGATTGCCCAATTGTTTTCCCAAGGCAAGGGCACCAAGCCCGACCCATTGAATGCC TATGTCTTCAGCCAGTTGGCTAAAGCCCAAGACACGCCAGAGGCCAATGACTTGGCCACGCAGCTGGAAACCCCACTGACTCCGGAGCAACGCGCCCAAG GCCAACGCCTGGTGCAACAGGAACTGGCCGCCCGCGGCACCCTGGCTCAGAGCACGCTGCAACTGCACGCCCTGGAAGAAGAAGACGGCGAGGAATCCCT
DNA Sequence for Gene
>PS417_RS22965
ATGAAGCTCAACCCATTCGTCAAGGCCGGCATCGGCCTGACCTTCGCCCTGCTGTGGTCGTGCCCTACCCTGGCCGCGCTGACCGAAGCCAAAAACTTCG GCCTGGAAGTCAAAGCCACCGCCCAGTCCGAAGATGACCGCGACCTCGGCACGCAGAAAGGCGGCGACGTCAACGGTATCGGCCTCGACCTGCGCCCGTG GATCTACGGTGAAAGCGGCGCGTGGAGCGCCTATGCCATGGGCCAGGCGGTAGTATCGAGCGACATCATCGAGACCGACACGCTGCAGCAGTCGGCGGAT GACGAAAACCAGCAGACCACCAACAACGACCGCAAAACCAAGAAAAACTACTTGGCCATGCGTGAGTTCTGGGTCGGCTACAGCGGCTTCACGCCTTACC CTGGCGAGATCCTCAAGTTGGGCCGCCAACGCCTGCGCAATGACGACGGCCAATGGCGCGACACCAACATCGAAGCGCTGAACTGGACCTTCGACACCAC CTTGCTCAAGGCCAACGTCGGCGTCGCTGAACGCTTCAGCGAATACCGCACCGACCTCAAGGAACTGTCGCCCAAGGATAAGGACCGTCAGCACCTCTAC GCCGACGCCGCCTACCAGTGGACGCCAGGCCAGTGGATCGGCCTGCGCGCTCACCACACCCATGACGACGGCAAGCTGGACTACCCGGAACCGGGCGTCG CCACTGACTCGCTGGACAAGCGCGAGAACGGCGACCTGACCTGGCTCGGCATCGAAGCCAACAGCGACGCCTACAACTGGCGCAACACCAACACCGTCAA CTATTGGGCGAGCATCACCGGTATGCAGGGCGACCGCGACACGGTCAACGCCTTGAACGCCGACGGCACCCGTCCGACCACGGCCAAGCGCAGCGATGAC GTGAATGGCTGGGCCACCGACCTGGGTATCCGCCTGCGCCTGGACCCACAGTGGCAAGTCGGTGCGGCCTACTCCCGCGCCAGCGCCGAATACGAGCAGA ACGGCCTGCAAAGCAACCGTTCGAACTGGACCGGCACCCAGTCCCGCGTGCACCGCTTCGGCGAAGCCTTCCGTGGCGAGATGAACAACATGCAGTCCAT GAGCTTGTTCGGCTCCTGGCAGCTGCGCGAGGACTACGACGCCAGCCTGGTGTACCACAAGTTCTGGCGCGTCGACGGCAACAAGCCGGTGGGCAGCAAC GGCATCGATGCCGTACAGAACAACACCGATGACGTGACCGGCGCGATCCTGTCCAGCACTTCCCTGCCGCTCGAAGACGGCAAGAAAGATCTGGGCCAGG AGATGGACCTGGTGGTCACCAAGTACTTCAAGACCGGCCTGTTGCCGGCTGCGCTCAGCCAGTCGATCGACGAGCCATCGGCCCTGGTGCGTTTCCGTGC AGGTGTGTTCAAGCCGGGCGACGCCTATGGCAGCCAGGTTGACTCGTACATGCATCGCGCCTTTGTCGACGTGATCTGGAAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGGAGCCTGCGCAATGAACCCTCAAGCCCTCAAAGGCTCGGCCATGTTGGCGGCAGCGATGCTGCTGGCCAGCGCTGCTGCCATGGCCGATGTCGCGCC GCAGGCTAAAGCGCCGACCATCGCCAAAGAGCTGCAACAGGCCAAGACCTACACCATCTCCAGCCCGCCGACCGCGCCGCTGGAAATGGCCAAGCCGGCC CTGCCGGACCTGTCGGGCTATACCGACGCGGCGATGGAAAAAAAGATCGTGCGCGCCAAGCCAGGCAAGATCAGCATCCGCCGCATGATGCAGGAAGATG CCCTTAAGGACTTCATCGGCGGTGACAACAAGATGGCCGAATGGGTGGTGCGCCAGCACGGCATTCCCCAGGCGATCTTTGTCGACGACGGCTACATGAA CCTCAAGGACTTGCTGGGCAAGGTGCCCAAACAGTACCTGAGCGAGACATCGCCGGGTGTATTCCTGGCCAAGTTGCCAATCGTGGTCGGTCGCAAGGGC
Amino Acid Sequence
>alginate regulatory protein AlgE
MKLNPFVKAGIGLTFALLWSCPTLAALTEAKNFGLEVKATAQSEDDRDLGTQKGGDVNGIGLDLRPWIYGESGAWSAYAMGQAVVSSDIIETDTLQQSAD DENQQTTNNDRKTKKNYLAMREFWVGYSGFTPYPGEILKLGRQRLRNDDGQWRDTNIEALNWTFDTTLLKANVGVAERFSEYRTDLKELSPKDKDRQHLY ADAAYQWTPGQWIGLRAHHTHDDGKLDYPEPGVATDSLDKRENGDLTWLGIEANSDAYNWRNTNTVNYWASITGMQGDRDTVNALNADGTRPTTAKRSDD VNGWATDLGIRLRLDPQWQVGAAYSRASAEYEQNGLQSNRSNWTGTQSRVHRFGEAFRGEMNNMQSMSLFGSWQLREDYDASLVYHKFWRVDGNKPVGSN GIDAVQNNTDDVTGAILSSTSLPLEDGKKDLGQEMDLVVTKYFKTGLLPAALSQSIDEPSALVRFRAGVFKPGDAYGSQVDSYMHRAFVDVIWKF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site