Pseudomonas simiae WCS417, PS417_RS25495

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain WCS417. [Details]
DNA Sequence Upstream of Gene
AGCAACCCGGCAGACCAGCACTCGTTCATCATCACCGAAGAGCTGGCGCCGACCCTCAGCCTGGAAGATGTGACTATCAATTGGGTTGCCGAGCCTCCGG CGCCTGCGCTGCGTCACGCCCTCACGGCGGAGCTTGCTCGCATGGTCGGCGACATGCACCGTGGCGGCGTGAACCACCGCGACTGCTACCTGTGCCACTT CCTGCTGGACACTGCCAAACCCATCGATGCGAAGAACATCAAGCTGTCGGTGATCGACCTGCACCGCGCCCAACTGCGTGCGCACTTGCCGTTGCGCTGG CGCGACAAGGACCTCTCCGCGCTGTATTACTCGGCGCTGGAAATCGGCCTGACCCGTCGCGACAAACTGCGCTTTCTCAAGGGTTACTTCCGCCAGCCGC TGCGCCAGATCCTGGCCGAGCACTCGGCGTCGTTGAGCCTGATGCAACGCAAGGCCGACAAGCTGTATGCACGCAAACAGCGCCTCGGGGATGCAATCTG
DNA Sequence for Gene
>PS417_RS25495
ATGGCGGGTTGGAACCTGGAACCGGTTTACGCCCACCTGGCGGATGATTTTGGCAGCCTCGAAGCGGTGTTCGCCCTGCAGGGCGAGCGGCTGACCCGTG ATCCGCTGTCGGAAGTGATCCGTGTGGAGCGGGGCGGGGTGAATTACTACGTCAAGCGCTACACCGGTGCGGGCAAGGGGTTGCGGCGTTACCTGGGCAA GCCTCGGGTCAAGTCCGAATGGCAGAACCTCAAGCGATTCGCCAAATGGGGCATCCCCACCGCCGATGTGGTCGCCTGGGGGCTGGAGCGCAAAGGCCTG GCCTACGACCGTGGGGCGATGATCACCCGCGAGTTGCCGAAGACCGAAGACCTTTCGGTACTGGCCGAGCGCAATGATGCGCGCCTGCACGACCCGAAGT GGGTCAACGCGGTGAGTCGCCAACTCGCCGAGTACACGCGCACCATGCACGAACATCGCTTTACCCATAACGATTTGAAGTGGCGCAACCTGCTGATCGA TGATCAGGCCACCCTGTACCTGATCGATTGCCCCAATGGTGATTTCTGGCGCGGGTTCTGGCTCAAGTACCGCATCACCAAAGACCTGGCGTGCCTGGAC AAGGTGGCCAAGTATCACCTGTCTGCCACCCAGCGCCTGCGGTTCTACATACAGTACCGTCAGTGCCGGCACCTGAGTGCGTCGGATAAAGAGCGGATTC GCCACGTGGTGAAGTTTTTCGAGGGACGCGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGATTTCCTGGCGGTTGAAGACCGTGCGCTGCTGGAGCGCCACGGCCTATCGACGTTCGACGCCTTGTGGGCCAAACAACTGGACGCGGTGGATGAACC CAATACCAGTCGCGGAGGTTGGAGCAGCGTGTTTCGCCTTGAACTCGACGGCCAGGGTTACTACCTCAAGCGCCAGAGCAATTACCTGACGCGCAGCTTG CACCGTCCTTTTGGCGAGCCGAGTTTCTCGCGTGAATTCCGCAATATCAGCCGTTACCGCAAGCTTGGCATTCCGGCCTTGCAAGCGGCGTTCTACGGCG AGCGCAAAGTCGATGGCGAACACCGCGCGATGCTGCTCACCCGCGCGCTGGACGGCTGGAATGACTTGGATTCGTTGCTGGAACAATGGGCGCAACTGAG CGACGCCCAGCACCGTGCGATCCTGCTGGCTTGCGGTCAGCTTGCTCGTCGGTTGCACAGCGTTGGCCAAGTGCATGGCTGTTTCTATCCCAAGCATATT
Amino Acid Sequence
>putative lipopolysaccharide core biosynthesis protein
MAGWNLEPVYAHLADDFGSLEAVFALQGERLTRDPLSEVIRVERGGVNYYVKRYTGAGKGLRRYLGKPRVKSEWQNLKRFAKWGIPTADVVAWGLERKGL AYDRGAMITRELPKTEDLSVLAERNDARLHDPKWVNAVSRQLAEYTRTMHEHRFTHNDLKWRNLLIDDQATLYLIDCPNGDFWRGFWLKYRITKDLACLD KVAKYHLSATQRLRFYIQYRQCRHLSASDKERIRHVVKFFEGRE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site