Pseudomonas simiae WCS417, PS417_RS26930

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain WCS417. [Details]
DNA Sequence Upstream of Gene
GCCTGGGGTGCTGGTGATCCATAACGACGAGGAGGGTGGCGTGGCGGAAGTCAAATCCCATGTCTCCCGCGATGTGGAGAAGCCAGGGCTGACGCTGGTG CCCGGCAAGGATCAGAACAAAGACGCGAGCTAAGGAAGCGCTTTGCAAGATCGTTCCCATGCAACGTGGGGACGATCGGGCTTAATCCCGACAAATGGGA TCCAATTCACAAAAATGCCGCAGAACTTTTCTGCTATTTCCGATACTAAGTTATCTCGGTAAGAAATTGATGGCCAATTAATGGCTATCTGTAAGTTCTC CGATGAATCGCCATCAAGGGTGCTGCCGCTGGTCGGAATAAAAATTCCATGATCAGAAGGCTTCTACCTATGATGATTTTTAGTTGTTATAAATCAATGC GTTGCGTGAAAAATTAGTACTAAGTTCCAACTAGCTCGGCTTTTTGAGTTGTAGGAAGTTAGGTGTTAGTTTGCGCCACTTGATTTTCGATGGATCGAAT
DNA Sequence for Gene
>PS417_RS26930
ATGTCTTTGTTATTGCCACGGACTCGGTTATTGCTGTGCACTTTCATGCTCGCTTATTTGGGCCTGAACAGTGCCACCGCCGCCCCTACGCCCGGGGATC AGGACCTGATCCGCGATCGGCAGAACCGCCTGCTTGAAGAGCAGCGCCGGCGCCTCGAAGAACTCAAGGACCTGCCCGGTAAAGAAGCCAGGCCCACGGC CCCGGCGACGCCTGCCGACACACGTTGCTTCCCGATCAGAGACATCGAACTCAAGGGCGCTGACAGTCTGTCTGCCGACGACCGCGCTGGCTTGCTCAAA CCCTACACAGGCCAGTGCCTGGGCGTTTCACAGCTCAATGAACTGCTCAAGGTCATCACGGACTTCTACCTCTCCAAAGGCCGCGTCACCAGCCGTGCCT ATCTGCCGCAGCAAGACCTTTCCAGCGGCCACCTGCAAGTGTTGGTGGTGGAAGGCAAGCTCGAAGCCTTGAAAAGCGCCCCAGGCAGTACCGTCACCGA CCGTGAGCTGGCGATGGCCTTTCCCGGCAAGGTGGGCGAGGCGCTCAACCTGCGTGAAGTCGAGCAACTGGTGGACCAGCTCAACCGTTTGCCCTCCAAG CAGGCGCAGATGGAACTGACCCCCGGTACGCAGATCGGCGGCAGTGAAGTGGTGGTCAAGAACACCCCGCAAAAACCCTGGCGCGCCAGCCTGTCGCGCA ATAACGATGGGCAGAAAAGCACCGGCGAACAGCAGTGGGGGGCAGGCCTTGAGTGGGACAGTCCCCTGGGCCTGGCCGATCACCTGGTACTGCGCGGCGG CCACGACGCCGTGAGTGACCACCAGAAAACCTCGAAAAACAGCATGCTCTACTACAACGTGCCGTGGGGCTGGTGGAACTTCAGCTACACCTACAGCGAA AGCGACTACCGCACCTATGGCATGCTCAACGACTTCAAATTCAAACAGAACGGCGACAACCAGAACCACCAACTGCGCGCTGAGCGGGTGGTCCACCGTG ACGACGTGAGCAAGACATCGGTGAACGTGGGCCTCGCGCACCTGCGCACTAATAACTACATCCTCGACACCCGTACAAGCACAAGCAGCAACCGCCTCAG CGAACTGCAACTGGGCATCAACCACGGGCGCCGTATCGGCAACGCATTCGTCAACGTCGACCTGGGCATGCAGAACGGCATCGGCATGTTCGACGCACAA TCTCAAGAGGAGCGCGACCCGTTCGGTAATCGCCAACCCAATTCACGCTACCGCAAATACACCGCCACCGTCAGCTACCTGCAGCCGTTCGCCCTGTGGG GCGAGTCGTTCAGTTTCTCCAGCCTCGCCACCGGCCAACGCAGTGAAGACATTCTGTTCAGCCCGCAGCGCATGAGCCTGGGTGGTTCTGCCTCGGTGCG TGGTTTCAAGGATCAGCAGTTGATCGGCGATAGCGGCGGCTACTGGCGCAACGAAGTGCGCTGGGCCCGTGCGGTGACCGTCGACTGGCTGCGCCCGGCT TTTGCTGAATACGGCGCCAGCGTCGGCTATGACCAAGGCGTGATCAGCAATGATCGCTATAACGACCGTGTGCACGGCCGGGTTTCGAGCAACTCCCTGG AGCTGTTCGCCCGCGGCAAGAACCTGAGCACCAGTGTGACCTTTGCGCATTCTTTGGAACGCCCGGCAGTGATGAGCGAGCGCGAAGCGCCGATCTACTT CCGTATGGATTTCTTCCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTAAACGCCCCGCAGCAACGAGAATCTGAAAATGGATGTTCGCCAATTTGCCTTTCTGGCCCGCCAACCTTCCGCGGCATTGATACCGCGTAACTCGTTC CTCGGCCTGCCCAAGCGCGGGCTGGTGCTGATACTGGCCAACGCGTTGTTCTGGCAGCCGCTGCTGGCCCGGGCCGACGGCATCGTGGTCAGTGCGCCGG GGACCACCGTTGGCGCGGCGGGTAATGGCGTGCCCGTGGTGAACATCGCGACGCCTAACGGCAGTGGCCTGTCCCACAACCAGTTCAAGGACTACAACGT GGGTCCCAACGGTGTGATCCTCAACAATGCCAACGGTGCGGTGACCAACACCCAGTTGGGCGGCTATATCGTCGGCAACCCCAACCTCAAGGGCGGCGCA GCCAGCGTCATCCTCAACGAAGTCAACGGCGGCAGCCCCAGCCAGCTGCGCGGCTACACCGAAGTGGCGGGGCAATCGGCCAAGGTCATCGTGGCCAACC
Amino Acid Sequence
>ShlB family hemolysin secretion/activation protein
MSLLLPRTRLLLCTFMLAYLGLNSATAAPTPGDQDLIRDRQNRLLEEQRRRLEELKDLPGKEARPTAPATPADTRCFPIRDIELKGADSLSADDRAGLLK PYTGQCLGVSQLNELLKVITDFYLSKGRVTSRAYLPQQDLSSGHLQVLVVEGKLEALKSAPGSTVTDRELAMAFPGKVGEALNLREVEQLVDQLNRLPSK QAQMELTPGTQIGGSEVVVKNTPQKPWRASLSRNNDGQKSTGEQQWGAGLEWDSPLGLADHLVLRGGHDAVSDHQKTSKNSMLYYNVPWGWWNFSYTYSE SDYRTYGMLNDFKFKQNGDNQNHQLRAERVVHRDDVSKTSVNVGLAHLRTNNYILDTRTSTSSNRLSELQLGINHGRRIGNAFVNVDLGMQNGIGMFDAQ SQEERDPFGNRQPNSRYRKYTATVSYLQPFALWGESFSFSSLATGQRSEDILFSPQRMSLGGSASVRGFKDQQLIGDSGGYWRNEVRWARAVTVDWLRPA FAEYGASVGYDQGVISNDRYNDRVHGRVSSNSLELFARGKNLSTSVTFAHSLERPAVMSEREAPIYFRMDFFL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site