Pseudomonas syringae pv. syringae B728a, Psyr_2759
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGACCTGCCTCTGGCGATGGGCAGTGATGCAGGCGTGGTCATCGAAGGCACGGTCAGCGCCTATGATCAGCATTACCAGTTGCTCACCGTAACCCTGC CCGACAGCAAACTGAGCATGCGCGTCGCCCACGCGCAGATGCAGGTCGGCACCCTGCTGCGCATCAAGGTCCAGGCCCGGGACGTCAGCCTCAACCTGCA ACCCGATTACCAGAGCAGCATTCTCAACCGCTTGCCGGTCACGGTGATCGAGGAAGCGCTGGCCGACAATTCGGCACACGTGCTGGTGAAGCTGGACGCT GGCGGCACGCCGCTGCTCGCACGCATCACTCGCTATTCCAGCGACCAACTGAACCTGCACAGAGGCCAGTCGCTCTGGGCGCAGATCAAGGCGGTCGCGG TGCTGGCCTGACCTTTCGAAAAAAACAGCCACGCAGCAAATAAACGGCACCACCGTAAAAGCCCGAGGTCAGTGTTTTTAACTGCCTTTGGAACTTAGCC
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| DNA Sequence for Gene |
>Psyr_2759
ATGCCTGACTCGACTGCCATCAGCCAGCCCGCCAGTGAACTGCATTACGTAGACGACACTCAACCGGGTCTTACGCGCAAGGTACTGCGCGGCAAATTCG CGTACTTTGACACCAAGGGTCAGCGCATCAAGGACGAGTCGGAGATCAAGCGCATCAACGCACTGGCAGTCCCGCCCGCCTACACCGAAGTGTGGATCTG TGCCGATCCGCTGGGCCACCTGCAGGCCACCGGCCGCGATGCCCGCGGGCGCAAGCAGTATCGCTACCATCCGCGCTGGCGCGAAATACGTGATCAGGAC AAATACTCGCGGCTGATCGAGTTCGGCCATGCGCTGCCCAAAGTGCGCAAGCAGATCGAAGCACAGCTCGCTCAGCCGGGCATGGGCCGGGAAAAAGTCA TGGCGACGGTCATTTCATTGCTGGACGCAACACTGATCCGCATCGGCAACAGCCAGTACACCAAGGAAAACCGCTCGTACGGCCTGACCACCCTGCGCAA CAAGCACGTCGAAGTCAAAGGCGGCCAGATCCTCTTCGAGTTCCGCGGCAAGAGCGGCGTCGAGCATAAAGTCAGCGTCAAGGATCGACGTCTGGCCAAC GTGATCAAACGCTGCATGGAACTGCCCGGACAAAACCTCTTCCAGTACCTGGACGAAGACGGCGTACGCCACGCGGTGACCTCTTCCGACATCAATGCCT ACCTGCAAAGCCTCACCGGCTCGGACTTCACCGCCAAGGACTACCGAACCTGGGCTGCCAGTGCGCTGGCACTGGCAACGCTGCAAAAACTGCACTGGGA GCCAGAGGCCGACGCCAAACGGCACATCGTCGACATGGTCAAGGCAGTCTCGAAACAACTGGGCAATACCCCCGCCATCTGCCGAAAATGCTACATCCAC CCGGCGGTTCTGGAAGGCTTCCTGCTCGGCAACCTGGCCAAACTCCCCCGCTCCCGACAACGCAAAGGCCTGCGCCTGGAAGAAGTTGCCCTGGCGAGCT ACCTGCGAATACTGGCTGACAAGGTCGAGGCCGTGGTGAACGATACGGTGGTGAAAGACAGCAAAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCCTGACCATGGCACGTCAGCCTTTGCACCAATAAAATTTCGTAGCCTCATGATTTGCCAAGCATTTCTGACGGGCAAAAAAGCAGCGTCTTGTACC TTTCGGGACGCTTTCAAGCTTGCTTCATAGGGGCCGGGTGTATATATTCCCTGCTCTTGGCGCTACCGCCCCGATGGCGAAATTGGTAGACGCAAGGGAC TTAAAATCCCTCGTCCTTTGGACGTGCCGGTTCGACCCCGGCTCGGGGCACCATTTAAAATCAAGGGGTTACGTGGCTTTAGTCACATCCCCCTTGAGCT TCATGCTCCGCAATAAATAATGCTGCTCCGCAACTCGTCGTAAACCCTACCCTCCCGGCGTCCTGCCGACGAACACCACTCCCCAAACCAGAAGCACTCA ACTACTGTATGTCTATACAGCAACTGAGAATCACTCATCATGAACATCGACTACGCCGAAGACTGGCCGCTCTGCCCCACGGAGGAGCAGATGCTCAAGC
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| Amino Acid Sequence |
>DNA topoisomerase I
MPDSTAISQPASELHYVDDTQPGLTRKVLRGKFAYFDTKGQRIKDESEIKRINALAVPPAYTEVWICADPLGHLQATGRDARGRKQYRYHPRWREIRDQD KYSRLIEFGHALPKVRKQIEAQLAQPGMGREKVMATVISLLDATLIRIGNSQYTKENRSYGLTTLRNKHVEVKGGQILFEFRGKSGVEHKVSVKDRRLAN VIKRCMELPGQNLFQYLDEDGVRHAVTSSDINAYLQSLTGSDFTAKDYRTWAASALALATLQKLHWEPEADAKRHIVDMVKAVSKQLGNTPAICRKCYIH PAVLEGFLLGNLAKLPRSRQRKGLRLEEVALASYLRILADKVEAVVNDTVVKDSKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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