Pseudomonas syringae pv. syringae B728a, Psyr_2138
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psb02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR43685 | GLYCOSYLTRANSFERASE | - | - | 5 | 277 | 2.6E-15 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | IPR029044 | Nucleotide-diphospho-sugar transferases | 3 | 221 | 1.2E-26 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | IPR029044 | Nucleotide-diphospho-sugar transferases | 6 | 281 | 4.59E-35 |
| Pfam | PF13641 | Glycosyltransferase like family 2 | - | - | 5 | 220 | 8.6E-13 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.