Pseudomonas syringae pv. syringae B728a, Psyr_2015
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTCCTCGCGGATATAACGCAGCGCTTCTCCGTCCGGATAAGGCCAGGGCACGTGGTGAGTCAGATAACGCACCACCTCCCACTGGTTGAACAGGCTTTG CATCGCTGCGGCGTCGTCAAGCTGCAAGGGCTGCAGGACCAGGCGCGGCGTGAACAGGGTCGGTGTGGGTATCGCGCTCAGATGGGTGATGTCAGGCATG GAAATAAGCTGCCGGGTATAGAGAGGAGGCCCAATCTATCCGTTAGGAAACGGCTGGTCTGTCAGGCATTTCTGGTTTTACAGCGGCTTTTGCAATTGCC AGTTCAAGGTGCGTCGTCGGGTGGCTCGCCCTGAGACAGTGCATTTTCGAGCGAAGTTGGCTACCCTGTCCGCCGTTTTTGCGTTGCCCTCACGAGGGGC GTTTCGCAAGGTACTGCCACGTCTTACGCCGACGGGCTGCGTCTGCCCCATTCATGGGTGACGTCCCATCCCTTATTTCGATTCCGTGTGGTCCCTCGTA
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| DNA Sequence for Gene |
>Psyr_2015
ATGAAAGTGTTGAAAGGCCAGGACATCCTGGCACTCGGTTTTATGACATTTGCCCTGTTCGTCGGGGCTGGCAACATCATCTTTCCCCCCATAGTGGGTC TGCAGGCCGGGCCGCATGTATGGATGGCGGCGCTGGGCTTTCTGGTCACCGCGGTTGGCTTGCCGGTCATTACCGTGATCGCTCTGGCCAGGGTCGGGGG CGCGATGGATGCCCTGAGCAGTCCGATTGGCAAGATCGCCGGCGGGGCGCTCGCTGCCGTCTGCTACCTGGCGGTCGGCCCTTTGTTCGCCACTCCGCGT ACCGCTACGGTCTCGTTCGAAGTCGGTCTGGCGCCGCTGACCGGCGACACCCCGATGGCATTGTTCCTCTACAGTCTGGTGTATTTTCTGGTGGTGTTCT GGGTTTCGCTGTACCCGGGGCGCTTGCTCGATACCGTCGGACGCTTTCTGGCGCCGCTCAAGATCATCGCGCTGGCGGTATTGGGCATCGCGGCATTCGC CTTGCCGGCAGGCGGAATAGGGGAGGCGGAGCCCGCGTACGCCGTAGCACCGTTTTCCCAGGGCTTCATCAATGGTTACCTGACCATGGATACGCTGGGG GCGCTGGTCTTCGGTATCGTCATCGTCAACGCGATCCGCTCTCGCGGTGTCGAATCGCCCCGTCTGATCACGCGTTACGCGATCATTGCCGGGCTGATTG CCGGAGTCGGGCTGGCGCTGGTGTATGTCAGTCTGTTTCGCCTCGGTTCTGGCAGCCACGCCGTGGCGGCAGGTGCCAGCAACGGAGCGGCGGTTCTGCA TGCCTACGTACAGCACACCTTCGGTTCGCTGGGCAGCGGATTCCTGGCCGTGCTGATTTCCCTGGCGTGTCTGGTCACTGCAGTAGGCCTGACCTGTGCC TGCGCCGAATACTTTGCCAAGGTGCTGCCGCTGTCCTACAGAACGCTGGTGATCATCCTCGCTGTGTTCTCGTTGCTGGTGTCCAATCTCGGGTTGACCA AACTGATCCAGTTTTCGATTCCGGTGCTCACGGCGATTTACCCGCCGTGCATCGTTCTGGTCGCGCTGAGCTTCTGCAAGGAGCTCTGGCAGAGCCAGGG ACGCGTGGTGGCGCCTGTGATGCTGGTTTCGCTGGTGTTCGGCCTGATCGATGCGCTGAAGGGCGCCGGTTTCGGCGACGCACTGCCCGATGTTCTGAGC CATCTGCCGCTGGGTGATCAGGGGCTTGCATGGCTGGTGCCCGCTGTTGTCACGCTGGCAGTTGCTGTGGTGGTAGACAGGGTCATGGGCAAGCGCAGCG AGGCGCTGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCCGTGCTTTAGACGATTGCGCAGGAAAAAACGTGTTGCATGAAGAGGCCCGCTATAAGCGGGCCTCTTTAGTTCTGCGAGCGTCTCAGCCTTACTTG GTGGCTGGTGCTGCTTCTGGCGCCTTGTTGGCGTTTTCATTGGTGCGCTGCTGAGCGGCTTCAGCGTTCTTCTGAGCGGCTTCCTGGCTTTCCTTGGCCG CGTCATTCACTTTTTCCTGAGCCTTTTCCATCGACTCCTGGGATTGCTGAGCTGCCTTGTTGGCATCTTGCTGGGTGTTTTCGGACTTTTTGTCACAGGC GGCAAGGCCCAGGGTGGCAGAAAGCATCAAGGCATAGGCTAAAGATTTACGCATGGGGTGTTTCTCCTTATTGATTATTCACGAGCCTAAGAGCCTGCCC CTGAGGGTTAAGTTCCACCGGTGACGACAATAATGGAGGGCGTTGTTTCACGGTCGTTACAGGCTGATCAAAGCGCGCCGGTCATGAGCCGTTCCGGCAA
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| Amino Acid Sequence |
>branched-chain amino acid ABC transporter
MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQAGPHVWMAALGFLVTAVGLPVITVIALARVGGAMDALSSPIGKIAGGALAAVCYLAVGPLFATPR TATVSFEVGLAPLTGDTPMALFLYSLVYFLVVFWVSLYPGRLLDTVGRFLAPLKIIALAVLGIAAFALPAGGIGEAEPAYAVAPFSQGFINGYLTMDTLG ALVFGIVIVNAIRSRGVESPRLITRYAIIAGLIAGVGLALVYVSLFRLGSGSHAVAAGASNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCA CAEYFAKVLPLSYRTLVIILAVFSLLVSNLGLTKLIQFSIPVLTAIYPPCIVLVALSFCKELWQSQGRVVAPVMLVSLVFGLIDALKGAGFGDALPDVLS HLPLGDQGLAWLVPAVVTLAVAVVVDRVMGKRSEALA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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