Pseudomonas syringae pv. syringae B728a, Psyr_1967
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAATTTAGCGC-N21-GCGCTAAATTT | 2279018 | 2279060 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TGCGGGTCAT-N17-ATGACCCGCA | 2279502 | 2279538 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TGCGACGCAGAGCGTCG-N94-CGACGCTCTGCGTCGCA | 2280856 | 2280983 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGACGCAGAGC-N61-GCTCTGCGTCG | 2280899 | 2280981 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGACGCTCTGCGTCGCA-N27-TGCGACGCAGAGCGTCG | 2280967 | 2281027 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GACGCTCTGCGTC-N7-GACGCAGAGCGTC | 2280968 | 2281000 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 578 | 2280962 | 2281006 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |