Pseudomonas syringae pv. syringae B728a, Psyr_1955
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGCGAAACGCTTCTGCGCCACCGACCTCGAAGCCGCGAAACAGAATCCCGCCGGCGCTGTACAGGTGCCCGGCGACCAGCGGCTTGAGTTCGCCCAGC GCTTCCATCAAGTCCAGACCGGGCTCGGGAGCCTGCACCAGCATCGGCAAGCTGCCTGCCCCTGCCAGCAACGGCCGGATATCCAAACTCAACGCATGAC TCATGATGTCTCTCCCTTGATGGCAAAAGCGCCCGAGCCCCTGCGGCCTGGCGCAACACCAATGTCCAGATTGAACGTACTGCGTCGCTGAAAAATTAAC CGTACCGCCCTATTCATGCGGCATGCGGAGGTGTTCGGCCGTCCTGAAACAATTTTTTGCATTTAAACGCAAAAAATTCCTATAGGAATTCAGTTCTCAT TCGTCTTTGACTTAATGTGACGCTTTTATATCGCCCGCGCGTACAGACAGAGGGGACCGCCCTGCGGCCGCTCCACATCGTGAATCGAGATTGTTTATCC
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| DNA Sequence for Gene |
>Psyr_1955
ATGTCGAAGAAGTCCCGTTCAAAAATCTGGTTTCTCGTCCACAGCTGGCTGGCCCTGCCGATCTGGTTCTTCGTGCTGATCGTCTGTGTGACCGGCACGC TGGCCGTGGTCAGCAAGGAAATCATGTGGCTGGCCAACCCGGAGATGCGTGACAACCGTCCTTCCGACGATGCCCAGCGCCTGAACTTCGAACAGATTCG CGCCACCATCGAACGCAACCAACCGGACCTGATCGTCGGCACCATCATGCAGCCGGACGGCGACTACTTCGCCTTGAGCGTGTTCATCACCTACCCCGAC GGGCGTTCGGTGCCGGCTTACGTCAACCCTTACACCGGGGTGATTCAGGGCATTACCCCGTCGTTCGACTTCCGCCGCTTCACCCGCGCGCTGCACGGCT GGTGGCTGGTGCCGTTTACCAACGGTTATTCGTGGGGCTGGTATCTGGTGTCGATTCTCGGCCTGCCGTTGCTGGCCTCACTGGTGACCGGGCTGGTGGT CTACAAGAAATTCTGGCGCGGCTTTTTCAAGCCCGTGCGTTTCAGCCAGGGCCCGCGGATTTTCTGGGGCGACCTGCATCGCCTCAGCGGCGTCTGGTCG ATCTGGTTCATTGCGGTGATTTCCATTACCGGCACGTGGTTTCTGATCCAGGCGATTCTGGGCGACAACCAGATCAGTATTTCCAGCAAATCCCAGGTCG CGTCGATCATCCCGCACAGCGCCGTACCACTGACTGCCGACGGCAGACCCGCGCCGACCATCAGCCTGGAGCGCGCCGTGGAAATCGCCAGGGAGCGGAT TCCGGGCCTGGAAGCCAGCTTCATCACGCCGCCGTTCAATGCCTACAGCAACCTGCAGGTGGGTGGGCGCAGCTGGTATCCATTGATGTTCCAGACTGCC GAAATCAACCCGTACAGCGGCGAGATTGCCGCCTCGCACCGGCTGTCGGACCGCAACAAACTGGAGTTCGTCACCGAGTCCATGCGTCCGCTGCACACCG GCGATTTCGGCGGCATCTGGATCAAGCTGATCTGGGCGTTCTTCGGTCTGCTGCTAAGCATGATGGTGCTCAGCGGCCTGTTGATCTGGAGCAAGCGTAC TGCACTGGCGACGCTCAACGCCCTCAAGCGTGAAACCCGAGCCCGCCCGGCAACGGCCGCTGCAACCCCACGAAACACCTCGCCCTCGCCGCTGGCGACC CGCACCCCGGAGAACAGCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAGGCCGCCACTGTTGCACAACCTGCATCGTCATTGAGTCGTTTCTGGCACAAATGGCGCTTCCATATCAACGTGCTGCTGGTGCTGATCCCGCTGGG TTTCATGCCCAAGTACTTTTCCGATAACGCGCTGGATCGCGGTGATCAGGGCCTTGGCCAGCGCGAGATCGGCGAGATTCAGGTCGGCCCGTGGAGCCTG CGCCTGGCAGAAGACCGCAACGAAGCGCCGCGCCTTTCCGGCCCATCGGGCTACATGAAAAGTTTCAATGCGGCGCTGTGCAACGCCTGCATCGACCGGG TCAAGGCCACTTATCTGCGCATCGGCAAACCGCGCAGCCTGCGCACCGCCGGGGTGATTTTCTTCGGTGGCGGCTACCGCATGAGCGCCTTCATGCAGAT TGCGCAAAACACCGATCCCGACGCCGAGCTGTGGATCACCATGGAAGGCTGGGACGGCGCCGTGCATCAGACCTCCATCCCCCTGCAACAGGCTTCGCCC
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| Amino Acid Sequence |
>peptidase
MSKKSRSKIWFLVHSWLALPIWFFVLIVCVTGTLAVVSKEIMWLANPEMRDNRPSDDAQRLNFEQIRATIERNQPDLIVGTIMQPDGDYFALSVFITYPD GRSVPAYVNPYTGVIQGITPSFDFRRFTRALHGWWLVPFTNGYSWGWYLVSILGLPLLASLVTGLVVYKKFWRGFFKPVRFSQGPRIFWGDLHRLSGVWS IWFIAVISITGTWFLIQAILGDNQISISSKSQVASIIPHSAVPLTADGRPAPTISLERAVEIARERIPGLEASFITPPFNAYSNLQVGGRSWYPLMFQTA EINPYSGEIAASHRLSDRNKLEFVTESMRPLHTGDFGGIWIKLIWAFFGLLLSMMVLSGLLIWSKRTALATLNALKRETRARPATAAATPRNTSPSPLAT RTPENSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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