Pseudomonas syringae pv. syringae B728a, Psyr_1293
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGTGACGAGGCGGCACGTTGCGAGCAGGCAGGCATGGACGGCCTGCTGATCAAGCCGCTGTCGCTGGCGCGTCTGGCCCAGGAGCTGGCAGATCGGGTAC GCGAGCCGACGTTCGACATCGGCACGCTGCAAGCCATGACTCAGGCCAACCCGCAACAAATGCAACGGTTGCTGAGCGAGTTATGGAAGAACCTCAGGCA TGAGCACGCGTTGCTGGAGCCCGCAGTGTCGGCCAATGACTGGAAGACCCTGGGCGCCTGTCTGCATCGGCTCAAGGGCGCGGCGAGTCTGGTCGACGCT GTGCCGCTCGCCAAGGCGTGTGCCGCGCTGGACGACAGTGTACGGCTGCAGAGCGCAGCCAGGCTGGCCGAACGCTGGCAGGTACTGGAAGTGGCCATGA CCGGTCTGCGCGCGGATATCGAATTGCAACTGGTGGCCGTGCCCGAGACCGCGGTGCCAGGCGCTTGAATCCTGCGGAAAACCTGTGGCGTGTTTAGGAC
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| DNA Sequence for Gene |
>Psyr_1293
ATGTCCTATGGGGCGGGTCTGCGGGACGAGCTACAGTTAATGCTATCCCGGGCCGATGGCTCTGACTCCGCAGGCGTGATCGTGCACTCACTCAAGGTTC TTATTCTCGAAGACCATCCCTTCCAGCTGATGGCTCTGCATCAGATGCTCAACGCCAATCAAGTGTTCGATGTGCTGGTGGCCGACAGCGTCGAGGTCGC CAGGCTTTCGCTGCAAACCCGCGGTCCTGTCGACATCGCGATCTGCGACCTGCAGATGGAAGGGCCTGATGGTCTGGAACTGATCCGCCTCATGGCTGAG AACGGCCTGGCGCGAGCGCTGATCATTGTCAGCTGTTCCGCCGCCTGCGTGCTGGAAGGGGCCGCGCAGCTGGCGCTCGCCCAAGGTCTGAATGTTCTGG GGTATGTGCAGAAACCTGCTTCCGCCGGGGCGTTGTACGAGTTGCTCGAGGCCTATGGGCCTGGCCGCTCGGACTGTATAGAGCAGGCATCGCCGGGCAG CGCGTTCAGAGCTCTTTCCGCCATCGAATTGTTTGACCCGACAGGCAGCGGACCGATAGACGTGGCGTCCATTGCCGAACAATGGATCACCTACTTTCAA CCCAAGGTCAGTCTGCAGGGCGAGTTGCTGGGGGCCGAAGCGTTGGTTCGCTGGCAGCATCCGGTGTATGGCCTGCTGGCCCCCGGGCGATTCATCAAGG CCATCGAGGCTGAAGGGCTGACCGTGGCGTTGACCTGGCGGGTGCTGGATCAGGCCCTGCAGTTCTCTGCGCAGGCCATGCGCGAGCAGGGCGAGCCGTT GTCGGTTGCCGTCAACATTGACCCTCAAGTGCTGCAACAGCTGGATTTCGCCGAGCAGATCACGCAGGCGCTTGCCCGTCATGGCGTGCCGGCCACCGCG CTGACCCTGGAAATTATCGAGCAGGACGCCGCACGGCCGGAAACCTGGCAGCTCGAAGGCCTGCTGAGGTTGTGCATGCAGGGTTGCAAGTTGTCCATCG ATGACTTTGGCATGGGCGCTTCGAATATGGACCGGCTTCTGCAATTACCTTTCAGCGAACTGAAAATACCGACCGAGTTCGTGCGCGGCATGGCCGACGA CGCGCGTAAATCGGCGGTAGTGGCCGGTGCCTTGCTCATGGCGCAGCGGCTGTCGATGTCGGTCGTGGTTGAAGGGGTCGAGACGATTGAAGACGTCCAC AGTCTGCTGGCGCTGGGCGATCCGGCCATTCAAGGGTATTTCATTGCGCGCCCGATGCCTGCCTCGGCGTTCATGCGCTGGATGGCTGAGCATGATAGCA GCCACCTGCACGCCGTTTCGAAGGACGACCGGCCTCAGGACATGCCGCTTTCCTGCAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGAACAGGGCAGCGTCATTGGCCAGTCCGAGCTTGCGCATGGCGGCGACTTTCTGGGCGCTGACGGTCTGTTTGCTGCGATTGAGTTGCGCCGCGATCT GGCCAACCGTATGGCCGGCCGAGAGCAGGCGTAACACTTCCAGCTCCCTTGGCGACAAGCGATCTGCCGGCAGCAGCGCGTCGGGCCCATGCTGACGGGC TTCGCTCAGGACGCTGCGTACCGAATCGGCGACAAAAAGCTCGCCGCGCCTTACGCTCTTGATGGCAGCAGGCAGTTCTCCGGCAAGGCTGGCCTTGCTC AACAGACCCCGGACATCCAGGTCAAGCATGGACTGAAACAGTCCGGCATTGCTCAGGGTCGTGACAACGATCACCGGCAGCGCCGGAAAGTCCCGGCGGA TGCGCTGCAGCAGACGCAGGCCATCGTTCTGCCGTTCAACGGGCATCATGAAGTCAGTCACCAGCACATCGCAGGCGTGGCGTTCGAGTACCTGAAGCAG
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| Amino Acid Sequence |
>EAL:response regulator receiver
MSYGAGLRDELQLMLSRADGSDSAGVIVHSLKVLILEDHPFQLMALHQMLNANQVFDVLVADSVEVARLSLQTRGPVDIAICDLQMEGPDGLELIRLMAE NGLARALIIVSCSAACVLEGAAQLALAQGLNVLGYVQKPASAGALYELLEAYGPGRSDCIEQASPGSAFRALSAIELFDPTGSGPIDVASIAEQWITYFQ PKVSLQGELLGAEALVRWQHPVYGLLAPGRFIKAIEAEGLTVALTWRVLDQALQFSAQAMREQGEPLSVAVNIDPQVLQQLDFAEQITQALARHGVPATA LTLEIIEQDAARPETWQLEGLLRLCMQGCKLSIDDFGMGASNMDRLLQLPFSELKIPTEFVRGMADDARKSAVVAGALLMAQRLSMSVVVEGVETIEDVH SLLALGDPAIQGYFIARPMPASAFMRWMAEHDSSHLHAVSKDDRPQDMPLSCK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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