Pseudomonas sp. WCS358, PC358_RS26165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS358 WCS358-Sc6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCACTGCACGACCTGTCACAACTGAGCGACGCCCTGTCTGCCGAGTCGGCCCCCGCCGCCCACCAGCAGGCGCCGAATGCACCGGTGGTGCAAAGCCTG GACGGCCAGCAGATCAAACTGCCCGGCTACATCGTGCCGCTGGAAGTCAGCGAGGAAGGCCGCACCACCGAGTTTCTGCTAGTGCCCTACTACGGCGCCT GCATCCACGTGCCCCCGCCGCCGTCGAATCAGATCGTGCATATTTTCAGCGAGATGGGCGTGCGCGTCGAAGACCTCTATCAGCCCTACTGGATCGAGGG AAAACTGCAGGTCAGAGCCTCCAGCAGCGAGCTGGCCGACGCCGGATACCAGATGGAAGCCGAGAAAATATACGCTTATGAGCTGAAGTGAGAACTGTTT CGAATTCGTTACGACGCTTCTTTGAGCTGGATCAAACTTTCTGTTTAGACGCCTCCGTACCATTGGACTACTCGATTATTAATGTCCTCTGGGAGCTTCC
DNA Sequence for Gene
>PC358_RS26165
ATGAACAAGTCCTTGCTTGGCGCCTCGCTTGTGGCCCTCGCCCTTGCCGCCCCTGCCGCCCACGCCTACCAGGCGGGCGATATGATTCTGCGCGCCGGCG CCATCACTACCGCGCCGAACGAAAGCAGCGGCGACCTGAAGTTCGATGGCAACAAGGTGTCGGGCACCAAGGCGACCCTGGACAGCGACACCCAGCTGGG CCTGACCTTCGCCTACATGCTCACCGACCACATCGGCCTGGAGTTGCTGGCGGCCACCCCGTTCAAGCACACCGTCGGCGTCAAGGGCCTGGGCGGCGGC CTGGACGGCAAGCTGGCCGACATCAAGCAACTGCCACCGACTCTGTCGCTGCAGTACTACCCGATGGAACCCAACTCCAGGTTCCAGCCGTATGCCGGCG TGGGCATCAACTACACCCTGTTCTTCGATGAAGACCTGAGCAGCGCACGCAAGCAACAGGGCTTCAGCAACCTGAAACTGCAGGATTCGGTGGGCATCGC TGGCCAGTTGGGCATGGACTACATGCTGACCGACAACCTGCTGGTCAACGCCTCTGTCTGGTACGTCGACATCGACACCAAGGCCAGTGTCAACGGCCCG ACCGCACTGGGCTACAGCAAGACCAAGGTCGACGTCGACGTTGACCCGTGGGTGTACATGGTCGGCCTTGGCTACAAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCGGGCCGGGAGGGCGGCCACGGCCGCGCTCCCGGTGCTCGACACCAGCCAGCAGCCCAGCGCTGTGGCACTGATCCCCGCCCCCAATCCGCACACCG CAGCCCATCCCCAACGGGCATAGACCCAGGTCGCCAGTACCGCACCCAGGCCGCTACCCAGCGAATAACAGCACATGTAGGCGCCAATCAGCCGGCTCGC CAGGGCGCTGCGCCCGGCCAACAACAGGCTCTGGTTGGTGACATGCACCGCCTGCACAGCGAAATCGAGCAATACCACGCCCAGCAGAAACGCCACTAGC GAGTGCTCGACGAACGCCGTCGGCAGCCACGACAGCGTCAGCACGCCCAAGGCCAGACCGGTGGTGCGATCGCCCCGCCCTTGGTCGGCCAGGCGACCGG CCCGGGCAGCGGCCAAGGCCCCCGCCACACCCGCCAGGCCAAACAGCCCGATCTGGGTATGGTTGAGCGCCAGGGGTGACGCACTCAGCGGCAGCACCAT
Amino Acid Sequence
>outer membrane protein W
MNKSLLGASLVALALAAPAAHAYQAGDMILRAGAITTAPNESSGDLKFDGNKVSGTKATLDSDTQLGLTFAYMLTDHIGLELLAATPFKHTVGVKGLGGG LDGKLADIKQLPPTLSLQYYPMEPNSRFQPYAGVGINYTLFFDEDLSSARKQQGFSNLKLQDSVGIAGQLGMDYMLTDNLLVNASVWYVDIDTKASVNGP TALGYSKTKVDVDVDPWVYMVGLGYKF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site